RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 SCN4AP35499 1836 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 PCNTO95613 3336 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
ZNF548-212ENST00000602086 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
ZNF548-212ENST00000602086 DDNO94850 711 aaPredicted RBP16.7■□□□□ 0.26
ZNF548-212ENST00000602086 EGFRP00533 1210 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 RASA3Q14644 834 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 TBC1D10BQ4KMP7 808 aaPredicted RBP16.7■□□□□ 0.26
ZNF548-212ENST00000602086 CCDC144CPQ8IYA2 1237 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 FBXO18Q8NFZ0 1043 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
ZNF548-212ENST00000602086 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 TEPSINQ96N21 525 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZNF548-212ENST00000602086 MYH4Q9Y623 1939 aa16.7■□□□□ 0.26
ZNF548-212ENST00000602086 LMOD1P29536 600 aaPredicted RBP16.69■□□□□ 0.26
ZNF548-212ENST00000602086 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
ZNF548-212ENST00000602086 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
ZNF548-212ENST00000602086 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
ZNF548-212ENST00000602086 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
ZNF548-212ENST00000602086 TMEM39BQ9GZU3 492 aa16.69■□□□□ 0.26
ZNF548-212ENST00000602086 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
ZNF548-212ENST00000602086 ADARB2Q9NS39 739 aaKnown RBP16.69■□□□□ 0.26
ZNF548-212ENST00000602086 HACL1Q9UJ83 578 aa16.69■□□□□ 0.26
ZNF548-212ENST00000602086 AKAP17AQ02040 695 aaKnown RBP16.68■□□□□ 0.26
ZNF548-212ENST00000602086 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 ATL3Q6DD88 541 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 PHKBQ93100 1093 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
ZNF548-212ENST00000602086 GUCY1A2P33402 732 aa16.67■□□□□ 0.26
ZNF548-212ENST00000602086 RESTQ13127 1097 aa16.67■□□□□ 0.26
ZNF548-212ENST00000602086 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
ZNF548-212ENST00000602086 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
ZNF548-212ENST00000602086 DEFB129Q9H1M3 183 aa16.67■□□□□ 0.26
ZNF548-212ENST00000602086 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
ZNF548-212ENST00000602086 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
ZNF548-212ENST00000602086 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
ZNF548-212ENST00000602086 XBP1P17861 261 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 EPS15P42566 896 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 TRIM29Q14134 588 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 TMEM87AQ8NBN3 555 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 TRPM4Q8TD43 1214 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
ZNF548-212ENST00000602086 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 PDHBP11177 359 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 CAP2P40123 477 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 ICA1Q05084 483 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 GPATCH4Q5T3I0 446 aaKnown RBP16.65■□□□□ 0.26
ZNF548-212ENST00000602086 DCAF15Q66K64 600 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 BRAPQ7Z569 592 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 DCAF4Q8WV16 495 aa16.65■□□□□ 0.26
ZNF548-212ENST00000602086 TCHHQ07283 1943 aa16.64■□□□□ 0.26
ZNF548-212ENST00000602086 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 DTNBO60941 627 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 GH2P01242 217 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 ASNSP08243 561 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 EEF2P13639 858 aaKnown RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 HIRAP54198 1017 aaPredicted RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 RRP1BQ14684 758 aaKnown RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 SEPT2Q15019 361 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 PKN1Q16512 942 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 KRT40Q6A162 431 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 USP50Q70EL3 339 aaPredicted RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 SIAH1Q8IUQ4 282 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 ZC3H15Q8WU90 426 aaKnown RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 SH3GLB2Q9NR46 395 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
ZNF548-212ENST00000602086 V9GY48 417 aaPredicted RBP16.64■□□□□ 0.25
ZNF548-212ENST00000602086 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 CTNND1O60716 968 aaKnown RBP16.63■□□□□ 0.25
ZNF548-212ENST00000602086 GDF11O95390 407 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
ZNF548-212ENST00000602086 STAG2Q8N3U4 1231 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 GMCL1Q96IK5 515 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 RIOX1Q9H6W3 641 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 ZNF112Q9UJU3 913 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 ASTN2O75129 1339 aaPredicted RBP16.63■□□□□ 0.25
ZNF548-212ENST00000602086 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
ZNF548-212ENST00000602086 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 MMP1P03956 469 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 SCG2P13521 617 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 KRT85P78386 507 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms