RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 TANGO6Q9C0B7 1094 aa20.08■□□□□ 0.81
NOTCH3-205ENST00000600841 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 ELNP15502 786 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 RASA1P20936 1047 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 MAPK4P31152 587 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 IRX6P78412 446 aaPredicted RBP20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 MTFR1Q15390 333 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 Q3C1V9 767 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 POTEEQ6S8J3 1075 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 CCDC129Q6ZRS4 1044 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 VCPKMTQ9H867 229 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 HELLSQ9NRZ9 838 aa20.07■□□□□ 0.8
NOTCH3-205ENST00000600841 GREB1LQ9C091 1923 aaPredicted RBP20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 SPDYE16A6NNV3 312 aaPredicted RBP20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 CCNA1P78396 465 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 COG2Q14746 738 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 KIAA1755Q5JYT7 1200 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 LBX2Q6XYB7 198 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 SPICE1Q8N0Z3 855 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 RILPL2Q969X0 211 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 OSBPL3Q9H4L5 887 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 HOXC10Q9NYD6 342 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 GJD2Q9UKL4 321 aa20.06■□□□□ 0.8
NOTCH3-205ENST00000600841 CNMDO75829 334 aa20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 CCL5P13501 91 aa20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 SOCS4Q8WXH5 440 aa20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 PORCNQ9H237 461 aa20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 CWC22Q9HCG8 908 aaKnown RBP20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 GOPCQ9HD26 462 aa20.05■□□□□ 0.8
NOTCH3-205ENST00000600841 PLXNB2O15031 1838 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 WDR46O15213 610 aaKnown RBP20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 PRDM1O75626 825 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 INHAP05111 366 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 PDE4BQ07343 736 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 PPARAQ07869 468 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 MCMDC2Q4G0Z9 681 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 PLEKHH3Q7Z736 793 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 FAM227BQ96M60 508 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 NUDT12Q9BQG2 462 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 RNF208Q9H0X6 261 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 RLFQ13129 1914 aa20.04■□□□□ 0.8
NOTCH3-205ENST00000600841 A0A0D9SFI3 127 aa20.03■□□□□ 0.8
NOTCH3-205ENST00000600841 FOXP2O15409 715 aa20.03■□□□□ 0.8
NOTCH3-205ENST00000600841 GPR142Q7Z601 462 aa20.03■□□□□ 0.8
NOTCH3-205ENST00000600841 BTBD7Q9P203 1132 aa20.03■□□□□ 0.8
NOTCH3-205ENST00000600841 RAD21O60216 631 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 FLOT1O75955 427 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 GJB1P08034 283 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 VPS53Q5VIR6 699 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 MB21D1Q8N884 522 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 NKX2-3Q8TAU0 364 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 UNC93B1Q9H1C4 597 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 NYAP2Q9P242 653 aa20.02■□□□□ 0.8
NOTCH3-205ENST00000600841 MYH4Q9Y623 1939 aa20.02■□□□□ 0.79
NOTCH3-205ENST00000600841 HMGCRP04035 888 aa20.01■□□□□ 0.79
NOTCH3-205ENST00000600841 CYP2B6P20813 491 aa20.01■□□□□ 0.79
NOTCH3-205ENST00000600841 DSG3P32926 999 aa20.01■□□□□ 0.79
NOTCH3-205ENST00000600841 NMIQ13287 307 aaPredicted RBP20.01■□□□□ 0.79
NOTCH3-205ENST00000600841 WDR78Q5VTH9 848 aa20.01■□□□□ 0.79
NOTCH3-205ENST00000600841 PARP14Q460N5 1801 aa20.01■□□□□ 0.79
NOTCH3-205ENST00000600841 A0A0G2JMZ2 1700 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 IGKV6D-41A0A0C4DH26 115 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 TSPY3P0CV98 308 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 TSPY8P0CW00 308 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 XRCC5P13010 732 aaKnown RBP20■□□□□ 0.79
NOTCH3-205ENST00000600841 RGS2P41220 211 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 GJA8P48165 433 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 ALX1Q15699 326 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 MORN1Q5T089 497 aa20■□□□□ 0.79
NOTCH3-205ENST00000600841 SAMD1Q6SPF0 538 aaPredicted RBP20■□□□□ 0.79
NOTCH3-205ENST00000600841 PLIN4Q96Q06 1357 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 SDSP20132 328 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 TRMT44Q8IYL2 757 aaKnown RBP19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 NEDD1Q8NHV4 660 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 USP6NLQ92738 828 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 ATG4CQ96DT6 458 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 MTMR4Q9NYA4 1195 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 CLIP2Q9UDT6 1046 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 IVNS1ABPQ9Y6Y0 642 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 CCDC171Q6TFL3 1326 aa19.99■□□□□ 0.79
NOTCH3-205ENST00000600841 TTLL1O95922 423 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 MFAP1P55081 439 aaKnown RBP19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 TFAP4Q01664 338 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 CTDSPL2Q05D32 466 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 FAM47AQ5JRC9 791 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 FAM83BQ5T0W9 1011 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 ZNF589Q86UQ0 364 aaPredicted RBP19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 U2AF1L4Q8WU68 220 aaKnown RBP19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 TRIB2Q92519 343 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 SHISA4Q96DD7 197 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 APBA2Q99767 749 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 MOV10L1Q9BXT6 1211 aaKnown RBP19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 DIAPH3Q9NSV4 1193 aa19.98■□□□□ 0.79
NOTCH3-205ENST00000600841 ANAPC4Q9UJX5 808 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms