RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 CCAR1Q8IX12 1150 aaKnown RBP17.5■□□□□ 0.39
HIF3A-218ENST00000600383 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 GMLQ99445 158 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 MAP3K14Q99558 947 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 CPVLQ9H3G5 476 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 ECM29Q5VYK3 1845 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 MYH6P13533 1939 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 SPTLC2O15270 562 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 NR1I2O75469 434 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 GNAQP50148 359 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 LRRC47Q8N1G4 583 aaKnown RBP17.5■□□□□ 0.39
HIF3A-218ENST00000600383 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 KLRF2D3W0D1 207 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 NFKBIEO00221 500 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 PARP1P09874 1014 aaKnown RBP17.49■□□□□ 0.39
HIF3A-218ENST00000600383 SCG2P13521 617 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 ATP2B1P20020 1258 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 MARCKSP29966 332 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-218ENST00000600383 EHD4Q9H223 541 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 FOXP1Q9H334 677 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-218ENST00000600383 DNAJC18Q9H819 358 aa17.49■□□□□ 0.39
HIF3A-218ENST00000600383 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-218ENST00000600383 CIAPIN1Q6FI81 312 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 NLGN2Q8NFZ4 835 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 KCNG4Q8TDN1 519 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 PHF20Q9BVI0 1012 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-218ENST00000600383 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 LETM1O95202 739 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-218ENST00000600383 YEATS4O95619 227 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 TTLL1O95922 423 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-218ENST00000600383 NLRP5P59047 1200 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 PFKFB3Q16875 520 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-218ENST00000600383 CERKLQ49MI3 558 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-218ENST00000600383 GPKOWQ92917 476 aaPredicted RBP eCLIP17.48■□□□□ 0.39
HIF3A-218ENST00000600383 PANK2Q9BZ23 570 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
HIF3A-218ENST00000600383 CYTH3O43739 400 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 RAD21O60216 631 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 KRT2P35908 639 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 FOXP4Q8IVH2 680 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-218ENST00000600383 AGBL3Q8NEM8 1001 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 CSRNP1Q96S65 589 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 RBSNQ9H1K0 784 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 NUP62CLQ9H1M0 184 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 ZNF70Q9UC06 446 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-218ENST00000600383 ENTPD3O75355 529 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
HIF3A-218ENST00000600383 SLC39A14Q15043 492 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-218ENST00000600383 ADALQ6DHV7 355 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 CCDC17Q96LX7 622 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 BRMS1Q9HCU9 246 aa17.47■□□□□ 0.39
HIF3A-218ENST00000600383 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-218ENST00000600383 RASSF7Q02833 373 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 SLC35G1Q2M3R5 365 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
HIF3A-218ENST00000600383 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 UBA5Q9GZZ9 404 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 TNMDQ9H2S6 317 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 TSPY26PQ9H489 355 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 GOLPH3LQ9H4A5 285 aa17.46■□□□□ 0.39
HIF3A-218ENST00000600383 IGKV6D-41A0A0C4DH26 115 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 NOVP48745 357 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
HIF3A-218ENST00000600383 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 RNF214Q8ND24 703 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 LZTS2Q9BRK4 669 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 MYH8P13535 1937 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 A0A1B0GVL5 298 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 FAM205CA6NFA0 338 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 GDF11O95390 407 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 PDHBP11177 359 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 CKAP2LQ8IYA6 745 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 DDX19AQ9NUU7 478 aaKnown RBP17.45■□□□□ 0.38
HIF3A-218ENST00000600383 PLIN4Q96Q06 1357 aa17.45■□□□□ 0.38
HIF3A-218ENST00000600383 TNIP1Q15025 636 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
HIF3A-218ENST00000600383 GPCPD1Q9NPB8 672 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-218ENST00000600383 MYO1BO43795 1136 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 PTPAQ15257 358 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 NBPF9Q3BBW0 867 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 SCAF8Q9UPN6 1271 aaKnown RBP17.44■□□□□ 0.38
HIF3A-218ENST00000600383 PCDHB6Q9Y5E3 794 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 GJA3Q9Y6H8 435 aa17.44■□□□□ 0.38
HIF3A-218ENST00000600383 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
HIF3A-218ENST00000600383 SEPT2Q15019 361 aa17.43■□□□□ 0.38
HIF3A-218ENST00000600383 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms