RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 TCRBV5S4A2TA0A5A2 114 aa25.59■■□□□ 1.69
PNKP-212ENST00000599454 GOLIM4O00461 696 aa25.59■■□□□ 1.69
PNKP-212ENST00000599454 MB21D1Q8N884 522 aa25.59■■□□□ 1.69
PNKP-212ENST00000599454 SHCBP1Q8NEM2 672 aa25.59■■□□□ 1.69
PNKP-212ENST00000599454 NPLOC4Q8TAT6 608 aa25.59■■□□□ 1.69
PNKP-212ENST00000599454 DNAJC2Q99543 621 aaKnown RBP25.59■■□□□ 1.69
PNKP-212ENST00000599454 ZBED9Q6R2W3 1325 aa25.59■■□□□ 1.69
PNKP-212ENST00000599454 A0A1W2PRG0 241 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 IGHA2P01877 340 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 OLFML2BQ68BL8 750 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 DPP9Q86TI2 863 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 LCORLQ8N3X6 602 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 SDR42E1Q8WUS8 393 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 MOV10L1Q9BXT6 1211 aaKnown RBP25.58■■□□□ 1.69
PNKP-212ENST00000599454 TANGO6Q9C0B7 1094 aa25.58■■□□□ 1.69
PNKP-212ENST00000599454 DNM1LO00429 736 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 RAB11FIP3O75154 756 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 CNGA1P29973 690 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 DEFB123Q8N688 67 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 SENP6Q9GZR1 1112 aaPredicted RBP25.57■■□□□ 1.68
PNKP-212ENST00000599454 SPATC1LQ9H0A9 340 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 SH2D4AQ9H788 454 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 ARHGEF10LQ9HCE6 1279 aa25.57■■□□□ 1.68
PNKP-212ENST00000599454 COL11A1P12107 1806 aaPredicted RBP25.57■■□□□ 1.68
PNKP-212ENST00000599454 CYBAP13498 195 aa25.56■■□□□ 1.68
PNKP-212ENST00000599454 CYP2C19P33261 490 aa25.56■■□□□ 1.68
PNKP-212ENST00000599454 ATP8A2Q9NTI2 1148 aa25.56■■□□□ 1.68
PNKP-212ENST00000599454 SLC5A4Q9NY91 659 aa25.56■■□□□ 1.68
PNKP-212ENST00000599454 DDX19BQ9UMR2 479 aa25.56■■□□□ 1.68
PNKP-212ENST00000599454 APBB1O00213 710 aa25.55■■□□□ 1.68
PNKP-212ENST00000599454 ADORA2AP29274 412 aa25.55■■□□□ 1.68
PNKP-212ENST00000599454 MROH8Q9H579 483 aa25.55■■□□□ 1.68
PNKP-212ENST00000599454 SMCHD1A6NHR9 2005 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 LTBP2Q14767 1821 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 PLXNA1Q9UIW2 1896 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 DSG3P32926 999 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 EVX2Q03828 476 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 ABRAQ8N0Z2 381 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 SLC44A5Q8NCS7 719 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 TRPV1Q8NER1 839 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 CCDC17Q96LX7 622 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.54■■□□□ 1.681e-10■□□□□ 9.6
PNKP-212ENST00000599454 CHMP4BQ9H444 224 aaKnown RBP25.54■■□□□ 1.68
PNKP-212ENST00000599454 ARMT1Q9H993 441 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 PAG1Q9NWQ8 432 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 TMX2Q9Y320 296 aa25.54■■□□□ 1.68
PNKP-212ENST00000599454 CYP2D6P10635 497 aa25.53■■□□□ 1.68
PNKP-212ENST00000599454 ERCC3P19447 782 aa25.53■■□□□ 1.68
PNKP-212ENST00000599454 ADD2P35612 726 aa25.53■■□□□ 1.68
PNKP-212ENST00000599454 MDM2Q00987 491 aaPredicted RBP25.53■■□□□ 1.68
PNKP-212ENST00000599454 ICA1Q05084 483 aa25.53■■□□□ 1.68
PNKP-212ENST00000599454 AMOTL1Q8IY63 956 aa25.53■■□□□ 1.68
PNKP-212ENST00000599454 ARRDC4Q8NCT1 418 aa25.53■■□□□ 1.68
PNKP-212ENST00000599454 LBHD1Q9BQE6 289 aaPredicted RBP25.53■■□□□ 1.68
PNKP-212ENST00000599454 ATP5JP18859 108 aa25.52■■□□□ 1.68
PNKP-212ENST00000599454 VCPKMTQ9H867 229 aa25.52■■□□□ 1.68
PNKP-212ENST00000599454 ZBTB40Q9NUA8 1239 aa25.52■■□□□ 1.68
PNKP-212ENST00000599454 STXBP5LQ9Y2K9 1186 aa25.52■■□□□ 1.68
PNKP-212ENST00000599454 WDR46O15213 610 aaKnown RBP25.51■■□□□ 1.67
PNKP-212ENST00000599454 FLOT1O75955 427 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 MBD4O95243 580 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 AKR1B1P15121 316 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 KIAA1755Q5JYT7 1200 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 SIRT2Q8IXJ6 389 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 MIER1Q8N108 512 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 DYNLL2Q96FJ2 89 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 DDRGK1Q96HY6 314 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 MTMR10Q9NXD2 777 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 PRKAG2Q9UGJ0 569 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 CUL9Q8IWT3 2517 aa25.51■■□□□ 1.67
PNKP-212ENST00000599454 DLL1O00548 723 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 SEPT4O43236 478 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 COL6A3P12111 3177 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 C12orf60Q5U649 245 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 Q7L0L9 218 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 SIAH1Q8IUQ4 282 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 BOLA2Q9H3K6 86 aa25.5■■□□□ 1.67
PNKP-212ENST00000599454 KBTBD13C9JR72 458 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 COBLO75128 1261 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 ATN1P54259 1190 aaPredicted RBP25.49■■□□□ 1.67
PNKP-212ENST00000599454 PLS1Q14651 629 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 UBE3CQ15386 1083 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 NCAPG2Q86XI2 1143 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 ATG4CQ96DT6 458 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 HAUS7Q99871 368 aa25.49■■□□□ 1.67
PNKP-212ENST00000599454 PRKAB2O43741 272 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 SLC25A27O95847 323 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 CDK8P49336 464 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 RTP1P59025 263 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 C16orf86Q6ZW13 317 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 SPICE1Q8N0Z3 855 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 COG6Q9Y2V7 657 aa25.48■■□□□ 1.67
PNKP-212ENST00000599454 GREB1LQ9C091 1923 aaPredicted RBP25.47■■□□□ 1.67
PNKP-212ENST00000599454 FCER1AP12319 257 aa25.47■■□□□ 1.67
PNKP-212ENST00000599454 GJC2Q5T442 439 aaPredicted RBP25.47■■□□□ 1.67
PNKP-212ENST00000599454 ZSCAN25Q6NSZ9 544 aa25.47■■□□□ 1.67
PNKP-212ENST00000599454 NRBP1Q9UHY1 535 aa25.47■■□□□ 1.67
PNKP-212ENST00000599454 DNAH12Q6ZR08 3092 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 USP17L12C9JPN9 530 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 USP17L21D6R901 530 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms