RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 WDR78Q5VTH9 848 aa17.77■□□□□ 0.44
IRF3-223ENST00000599223 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.44
IRF3-223ENST00000599223 TRMT44Q8IYL2 757 aaKnown RBP17.77■□□□□ 0.44
IRF3-223ENST00000599223 CABP5Q9NP86 173 aa17.77■□□□□ 0.44
IRF3-223ENST00000599223 DDX19BQ9UMR2 479 aa17.77■□□□□ 0.44
IRF3-223ENST00000599223 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
IRF3-223ENST00000599223 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
IRF3-223ENST00000599223 PTPREP23469 700 aa17.76■□□□□ 0.43
IRF3-223ENST00000599223 ADD2P35612 726 aa17.76■□□□□ 0.43
IRF3-223ENST00000599223 NPLOC4Q8TAT6 608 aa17.76■□□□□ 0.43
IRF3-223ENST00000599223 BOLA2Q9H3K6 86 aa17.76■□□□□ 0.43
IRF3-223ENST00000599223 PAG1Q9NWQ8 432 aa17.76■□□□□ 0.43
IRF3-223ENST00000599223 LTBP2Q14767 1821 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 HMMRO75330 724 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 IGHA2P01877 340 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 AKR1B1P15121 316 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 MAGEA10P43363 369 aaPredicted RBP17.75■□□□□ 0.43
IRF3-223ENST00000599223 CCNA1P78396 465 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 LRRC26Q2I0M4 334 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 SIAH1Q8IUQ4 282 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 TRPV1Q8NER1 839 aa17.75■□□□□ 0.43
IRF3-223ENST00000599223 CWC22Q9HCG8 908 aaKnown RBP17.75■□□□□ 0.43
IRF3-223ENST00000599223 SLC15A5A6NIM6 579 aa17.74■□□□□ 0.43
IRF3-223ENST00000599223 HOXC6P09630 235 aa17.74■□□□□ 0.43
IRF3-223ENST00000599223 HAUS7Q99871 368 aa17.74■□□□□ 0.43
IRF3-223ENST00000599223 MOV10L1Q9BXT6 1211 aaKnown RBP17.74■□□□□ 0.43
IRF3-223ENST00000599223 TANGO6Q9C0B7 1094 aa17.74■□□□□ 0.43
IRF3-223ENST00000599223 ZNFX1Q9P2E3 1918 aaKnown RBP17.73■□□□□ 0.43
IRF3-223ENST00000599223 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
IRF3-223ENST00000599223 MS4A1P11836 297 aa17.73■□□□□ 0.43
IRF3-223ENST00000599223 ATP5JP18859 108 aa17.73■□□□□ 0.43
IRF3-223ENST00000599223 CYP2C19P33261 490 aa17.73■□□□□ 0.43
IRF3-223ENST00000599223 TMEM179Q6ZVK1 233 aa17.73■□□□□ 0.43
IRF3-223ENST00000599223 SPICE1Q8N0Z3 855 aa17.73■□□□□ 0.43
IRF3-223ENST00000599223 PLXNA1Q9UIW2 1896 aa17.72■□□□□ 0.43
IRF3-223ENST00000599223 GLRX3O76003 335 aaKnown RBP17.72■□□□□ 0.43
IRF3-223ENST00000599223 BMP8BP34820 402 aa17.72■□□□□ 0.43
IRF3-223ENST00000599223 IVNS1ABPQ9Y6Y0 642 aa17.72■□□□□ 0.43
IRF3-223ENST00000599223 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
IRF3-223ENST00000599223 CYBAP13498 195 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 ADORA2AP29274 412 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 ICA1Q05084 483 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 COG2Q14746 738 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 MFSD14CQ5VZR4 134 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 ATG4CQ96DT6 458 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 SPATC1LQ9H0A9 340 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 DDX20Q9UHI6 824 aaKnown RBP17.71■□□□□ 0.43
IRF3-223ENST00000599223 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
IRF3-223ENST00000599223 ERCC3P19447 782 aa17.7■□□□□ 0.42
IRF3-223ENST00000599223 C12orf60Q5U649 245 aa17.7■□□□□ 0.42
IRF3-223ENST00000599223 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
IRF3-223ENST00000599223 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
IRF3-223ENST00000599223 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 USP17L21D6R901 530 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 COBLO75128 1261 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 FLOT1O75955 427 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 CDK8P49336 464 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 ATP2B2Q01814 1243 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 C16orf86Q6ZW13 317 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 LPAR1Q92633 364 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.69■□□□□ 0.422e-6■■■■□ 21.1
IRF3-223ENST00000599223 VCPKMTQ9H867 229 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 TMX2Q9Y320 296 aa17.69■□□□□ 0.42
IRF3-223ENST00000599223 CNGA1P29973 690 aa17.68■□□□□ 0.42
IRF3-223ENST00000599223 DSG3P32926 999 aa17.68■□□□□ 0.42
IRF3-223ENST00000599223 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
IRF3-223ENST00000599223 ARHGEF10LQ9HCE6 1279 aa17.68■□□□□ 0.42
IRF3-223ENST00000599223 FBXO28Q9NVF7 368 aa17.68■□□□□ 0.42
IRF3-223ENST00000599223 MYH4Q9Y623 1939 aa17.68■□□□□ 0.42
IRF3-223ENST00000599223 EEF2P13639 858 aaKnown RBP17.67■□□□□ 0.42
IRF3-223ENST00000599223 MDM2Q00987 491 aaPredicted RBP17.67■□□□□ 0.42
IRF3-223ENST00000599223 PLS1Q14651 629 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 TSHZ3Q63HK5 1081 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 OLFML2BQ68BL8 750 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 SAMD1Q6SPF0 538 aaPredicted RBP17.67■□□□□ 0.42
IRF3-223ENST00000599223 Q7L0L9 218 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 TDHQ8IZJ6 230 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
IRF3-223ENST00000599223 LRRCC1Q9C099 1032 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 SENP6Q9GZR1 1112 aaPredicted RBP17.67■□□□□ 0.42
IRF3-223ENST00000599223 HOXC10Q9NYD6 342 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 SLC4A4Q9Y6R1 1079 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 A0A0C4DFX4 3053 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
IRF3-223ENST00000599223 DNM1LO00429 736 aa17.66■□□□□ 0.42
IRF3-223ENST00000599223 WDR46O15213 610 aaKnown RBP17.66■□□□□ 0.42
IRF3-223ENST00000599223 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
IRF3-223ENST00000599223 TMEM132BQ14DG7 1078 aa17.66■□□□□ 0.42
IRF3-223ENST00000599223 DPP9Q86TI2 863 aa17.66■□□□□ 0.42
IRF3-223ENST00000599223 MB21D1Q8N884 522 aa17.66■□□□□ 0.42
IRF3-223ENST00000599223 UBE2OQ9C0C9 1292 aaKnown RBP17.66■□□□□ 0.42
IRF3-223ENST00000599223 MSCO60682 206 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 LRIT3Q3SXY7 679 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 PRAMEF19Q5SWL8 479 aa17.65■□□□□ 0.42
IRF3-223ENST00000599223 GJC2Q5T442 439 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 261.9 ms