RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 VCPKMTQ9H867 229 aa17.45■□□□□ 0.38
XRCC1-208ENST00000598422 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
XRCC1-208ENST00000598422 IGHDP01880 384 aa17.44■□□□□ 0.38
XRCC1-208ENST00000598422 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
XRCC1-208ENST00000598422 NUCB1Q02818 461 aa17.44■□□□□ 0.38
XRCC1-208ENST00000598422 ZNF444Q8N0Y2 327 aaPredicted RBP17.44■□□□□ 0.38
XRCC1-208ENST00000598422 PORCNQ9H237 461 aa17.44■□□□□ 0.38
XRCC1-208ENST00000598422 GOPCQ9HD26 462 aa17.44■□□□□ 0.38
XRCC1-208ENST00000598422 HOXC10Q9NYD6 342 aa17.44■□□□□ 0.38
XRCC1-208ENST00000598422 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
XRCC1-208ENST00000598422 FLOT1O75955 427 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 HMGCRP04035 888 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 RASA1P20936 1047 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 PDE4BQ07343 736 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 COG2Q14746 738 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
XRCC1-208ENST00000598422 LBX2Q6XYB7 198 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 CCDC129Q6ZRS4 1044 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 GPR142Q7Z601 462 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 PLEKHH3Q7Z736 793 aa17.43■□□□□ 0.38
XRCC1-208ENST00000598422 PRDM1O75626 825 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 GJB1P08034 283 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 CYP2B6P20813 491 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 PPARAQ07869 468 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 Q3C1V9 767 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 SIAH1Q8IUQ4 282 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 RILPL2Q969X0 211 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 GJD2Q9UKL4 321 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 IVNS1ABPQ9Y6Y0 642 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 MYH7P12883 1935 aa17.42■□□□□ 0.38
XRCC1-208ENST00000598422 CNMDO75829 334 aa17.41■□□□□ 0.38
XRCC1-208ENST00000598422 RGS2P41220 211 aa17.41■□□□□ 0.38
XRCC1-208ENST00000598422 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
XRCC1-208ENST00000598422 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
XRCC1-208ENST00000598422 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
XRCC1-208ENST00000598422 MB21D1Q8N884 522 aa17.41■□□□□ 0.38
XRCC1-208ENST00000598422 BTBD7Q9P203 1132 aa17.41■□□□□ 0.38
XRCC1-208ENST00000598422 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
XRCC1-208ENST00000598422 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
XRCC1-208ENST00000598422 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
XRCC1-208ENST00000598422 GJA8P48165 433 aa17.4■□□□□ 0.38
XRCC1-208ENST00000598422 PRPF38BQ5VTL8 546 aaKnown RBP17.4■□□□□ 0.38
XRCC1-208ENST00000598422 POTEEQ6S8J3 1075 aa17.4■□□□□ 0.38
XRCC1-208ENST00000598422 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
XRCC1-208ENST00000598422 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
XRCC1-208ENST00000598422 APBA2Q99767 749 aa17.4■□□□□ 0.38
XRCC1-208ENST00000598422 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.4■□□□□ 0.38
XRCC1-208ENST00000598422 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 XRCC5P13010 732 aaKnown RBP17.39■□□□□ 0.37
XRCC1-208ENST00000598422 PLS1Q14651 629 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 MCMDC2Q4G0Z9 681 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 SHISA4Q96DD7 197 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 NYAP2Q9P242 653 aa17.39■□□□□ 0.37
XRCC1-208ENST00000598422 BAZ2AQ9UIF9 1905 aaKnown RBP17.39■□□□□ 0.37
XRCC1-208ENST00000598422 DSG3P32926 999 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
XRCC1-208ENST00000598422 FAM83BQ5T0W9 1011 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 VPS53Q5VIR6 699 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 TRIB2Q92519 343 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 DEFB118Q96PH6 123 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.38■□□□□ 0.37
XRCC1-208ENST00000598422 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
XRCC1-208ENST00000598422 SLC15A5A6NIM6 579 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
XRCC1-208ENST00000598422 MAP2K5Q13163 448 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 PPP4R3BQ5MIZ7 849 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 MORN1Q5T089 497 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 MOV10L1Q9BXT6 1211 aaKnown RBP17.37■□□□□ 0.37
XRCC1-208ENST00000598422 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 HMX1Q9NP08 348 aaPredicted RBP17.37■□□□□ 0.37
XRCC1-208ENST00000598422 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 CCDC171Q6TFL3 1326 aa17.37■□□□□ 0.37
XRCC1-208ENST00000598422 KIAA0100Q14667 2235 aaKnown RBP17.37■□□□□ 0.37
XRCC1-208ENST00000598422 CENPFP49454 3210 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 RBBP6Q7Z6E9 1792 aaKnown RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 FOXP2O15409 715 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 FARP2O94887 1054 aaPredicted RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 SGPL1O95470 568 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 TTLL1O95922 423 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 NDUFB10O96000 172 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 PTPREP23469 700 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 TFAP4Q01664 338 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 FAM47AQ5JRC9 791 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 NCAPG2Q86XI2 1143 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 SHCBP1Q8NEM2 672 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 PAK6Q9NQU5 681 aaPredicted RBP17.36■□□□□ 0.37
XRCC1-208ENST00000598422 FBXO28Q9NVF7 368 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 MTMR4Q9NYA4 1195 aa17.36■□□□□ 0.37
XRCC1-208ENST00000598422 PPP1R9AQ9ULJ8 1098 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms