RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 GCC1Q96CN9 775 aa14.36□□□□□ -0.11
SOD3-202ENST00000593742 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
SOD3-202ENST00000593742 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
SOD3-202ENST00000593742 PORCNQ9H237 461 aa14.36□□□□□ -0.11
SOD3-202ENST00000593742 ARHGEF10LQ9HCE6 1279 aa14.36□□□□□ -0.11
SOD3-202ENST00000593742 GSG1L2A8MUP6 293 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
SOD3-202ENST00000593742 POTEEQ6S8J3 1075 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 NUDT12Q9BQG2 462 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 LNPKQ9C0E8 428 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 MKNK2Q9HBH9 465 aa14.35□□□□□ -0.11
SOD3-202ENST00000593742 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
SOD3-202ENST00000593742 SPDYE16A6NNV3 312 aaPredicted RBP14.34□□□□□ -0.11
SOD3-202ENST00000593742 CNMDO75829 334 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 GJB1P08034 283 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 MAPK4P31152 587 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 TRIM32Q13049 653 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 KIAA1755Q5JYT7 1200 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 POTEHQ6S545 545 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 GPR142Q7Z601 462 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 NKX2-3Q8TAU0 364 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 U2AF1L4Q8WU68 220 aaKnown RBP14.34□□□□□ -0.11
SOD3-202ENST00000593742 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 GJD2Q9UKL4 321 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 RABGAP1Q9Y3P9 1069 aa14.34□□□□□ -0.11
SOD3-202ENST00000593742 PRDM1O75626 825 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 FLOT1O75955 427 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 HMGCRP04035 888 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
SOD3-202ENST00000593742 GNAT2P19087 354 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 GJA8P48165 433 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 CCNA1P78396 465 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 TRIB2Q92519 343 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 BTBD7Q9P203 1132 aa14.33□□□□□ -0.12
SOD3-202ENST00000593742 PLXNB2O15031 1838 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 TFRCP02786 760 aaKnown RBP14.32□□□□□ -0.12
SOD3-202ENST00000593742 PDE1AP54750 535 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 PLS1Q14651 629 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 IFNL3Q8IZI9 196 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.32□□□□□ -0.12
SOD3-202ENST00000593742 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
SOD3-202ENST00000593742 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
SOD3-202ENST00000593742 SALL3Q9BXA9 1300 aa14.32□□□□□ -0.12
SOD3-202ENST00000593742 TRIM6-TRIM34B2RNG4 842 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
SOD3-202ENST00000593742 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
SOD3-202ENST00000593742 SGPL1O95470 568 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 ZKSCAN1P17029 563 aaPredicted RBP14.31□□□□□ -0.12
SOD3-202ENST00000593742 RASA1P20936 1047 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 RGS2P41220 211 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
SOD3-202ENST00000593742 COG2Q14746 738 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 CCL14Q16627 93 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 ZMYM1Q5SVZ6 1142 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 GIMAP6Q6P9H5 292 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 LPAR1Q92633 364 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 NAPBQ9H115 298 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 IVNS1ABPQ9Y6Y0 642 aa14.31□□□□□ -0.12
SOD3-202ENST00000593742 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
SOD3-202ENST00000593742 ZNF444Q8N0Y2 327 aaPredicted RBP14.3□□□□□ -0.12
SOD3-202ENST00000593742 DPF3Q92784 378 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 RILPL2Q969X0 211 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 EVI5LQ96CN4 794 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 ATG4CQ96DT6 458 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
SOD3-202ENST00000593742 GOPCQ9HD26 462 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 HOXC10Q9NYD6 342 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
SOD3-202ENST00000593742 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
SOD3-202ENST00000593742 IGHDP01880 384 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 PPARAQ07869 468 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 MORN1Q5T089 497 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 FAM83BQ5T0W9 1011 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 NCAPG2Q86XI2 1143 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
SOD3-202ENST00000593742 APBA2Q99767 749 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 MOV10L1Q9BXT6 1211 aaKnown RBP14.29□□□□□ -0.12
SOD3-202ENST00000593742 ZNF287Q9HBT7 754 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 HMX1Q9NP08 348 aaPredicted RBP14.29□□□□□ -0.12
SOD3-202ENST00000593742 PAK6Q9NQU5 681 aaPredicted RBP14.29□□□□□ -0.12
SOD3-202ENST00000593742 FBXO28Q9NVF7 368 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 STAP2Q9UGK3 403 aa14.29□□□□□ -0.12
SOD3-202ENST00000593742 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
SOD3-202ENST00000593742 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
SOD3-202ENST00000593742 PTPREP23469 700 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms