RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 ARHGEF10LQ9HCE6 1279 aa19.27■□□□□ 0.68
CNN1-209ENST00000592338 CNMDO75829 334 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 EEF2P13639 858 aaKnown RBP19.26■□□□□ 0.67
CNN1-209ENST00000592338 ELNP15502 786 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 PDE4AP27815 886 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 Q3C1V9 767 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 SPICE1Q8N0Z3 855 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 COA7Q96BR5 231 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
CNN1-209ENST00000592338 PLXNA1Q9UIW2 1896 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 SPDYE16A6NNV3 312 aaPredicted RBP19.25■□□□□ 0.67
CNN1-209ENST00000592338 ERVK-9P63128 1117 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 ERVK-24P63145 666 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 PPARAQ07869 468 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 MTFR1Q15390 333 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 ZNF589Q86UQ0 364 aaPredicted RBP19.25■□□□□ 0.67
CNN1-209ENST00000592338 GPRC5AQ8NFJ5 357 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 TANGO6Q9C0B7 1094 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 PORCNQ9H237 461 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 VCPKMTQ9H867 229 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 TMX2Q9Y320 296 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 FRMPD3Q5JV73 1810 aa19.25■□□□□ 0.67
CNN1-209ENST00000592338 ADCY3O60266 1144 aa19.24■□□□□ 0.67
CNN1-209ENST00000592338 EN2P19622 333 aaPredicted RBP19.24■□□□□ 0.67
CNN1-209ENST00000592338 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
CNN1-209ENST00000592338 SH2D4AQ9H788 454 aa19.24■□□□□ 0.67
CNN1-209ENST00000592338 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
CNN1-209ENST00000592338 CTDSPL2Q05D32 466 aa19.23■□□□□ 0.67
CNN1-209ENST00000592338 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
CNN1-209ENST00000592338 SLAIN1Q8ND83 568 aa19.23■□□□□ 0.67
CNN1-209ENST00000592338 TMEM106CQ9BVX2 250 aa19.23■□□□□ 0.67
CNN1-209ENST00000592338 BTBD7Q9P203 1132 aa19.23■□□□□ 0.67
CNN1-209ENST00000592338 BIN2Q9UBW5 565 aaPredicted RBP19.23■□□□□ 0.67
CNN1-209ENST00000592338 ZNF236Q9UL36 1845 aa19.23■□□□□ 0.67
CNN1-209ENST00000592338 RAD21O60216 631 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 SDSP20132 328 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 IRF5Q13568 498 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 INCENPQ9NQS7 918 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 GJD2Q9UKL4 321 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 RABGAP1Q9Y3P9 1069 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 TACC3Q9Y6A5 838 aa19.22■□□□□ 0.67
CNN1-209ENST00000592338 PLIN4Q96Q06 1357 aa19.21■□□□□ 0.67
CNN1-209ENST00000592338 IGKV6D-41A0A0C4DH26 115 aa19.21■□□□□ 0.67
CNN1-209ENST00000592338 FAM47AQ5JRC9 791 aa19.21■□□□□ 0.67
CNN1-209ENST00000592338 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
CNN1-209ENST00000592338 LBX2Q6XYB7 198 aa19.21■□□□□ 0.67
CNN1-209ENST00000592338 ZNF444Q8N0Y2 327 aaPredicted RBP19.21■□□□□ 0.67
CNN1-209ENST00000592338 LPAR1Q92633 364 aa19.21■□□□□ 0.67
CNN1-209ENST00000592338 CCDC171Q6TFL3 1326 aa19.21■□□□□ 0.67
CNN1-209ENST00000592338 MKI67P46013 3256 aaKnown RBP19.2■□□□□ 0.66
CNN1-209ENST00000592338 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
CNN1-209ENST00000592338 INHAP05111 366 aa19.2■□□□□ 0.66
CNN1-209ENST00000592338 PDE4BQ07343 736 aa19.2■□□□□ 0.66
CNN1-209ENST00000592338 COG2Q14746 738 aa19.2■□□□□ 0.66
CNN1-209ENST00000592338 CEP95Q96GE4 821 aa19.2■□□□□ 0.66
CNN1-209ENST00000592338 UNC93B1Q9H1C4 597 aa19.2■□□□□ 0.66
CNN1-209ENST00000592338 GOPCQ9HD26 462 aa19.2■□□□□ 0.66
CNN1-209ENST00000592338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
CNN1-209ENST00000592338 FLOT1O75955 427 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 SLC3A2P08195 630 aaKnown RBP19.19■□□□□ 0.66
CNN1-209ENST00000592338 HSPD1P10809 573 aaKnown RBP19.19■□□□□ 0.66
CNN1-209ENST00000592338 CCL5P13501 91 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
CNN1-209ENST00000592338 CYP2B6P20813 491 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 MAPK4P31152 587 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 UBXN2AP68543 259 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 FAM83BQ5T0W9 1011 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 GPR142Q7Z601 462 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 TICAM2Q86XR7 235 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 CCAR1Q8IX12 1150 aaKnown RBP19.19■□□□□ 0.66
CNN1-209ENST00000592338 PXYLP1Q8TE99 480 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 ATG4CQ96DT6 458 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 NUP88Q99567 741 aaPredicted RBP19.19■□□□□ 0.66
CNN1-209ENST00000592338 ZNF287Q9HBT7 754 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 FBXO28Q9NVF7 368 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 NYAP2Q9P242 653 aa19.19■□□□□ 0.66
CNN1-209ENST00000592338 ALPK3Q96L96 1907 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 FGAP02671 866 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 TSPY3P0CV98 308 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 TSPY8P0CW00 308 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 DSG3P32926 999 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 TFAP4Q01664 338 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 ALX1Q15699 326 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 WDR78Q5VTH9 848 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
CNN1-209ENST00000592338 PLEKHH3Q7Z736 793 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 NEDD1Q8NHV4 660 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 SHISA4Q96DD7 197 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 DIAPH3Q9NSV4 1193 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 CLIP2Q9UDT6 1046 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 SMCHD1A6NHR9 2005 aa19.18■□□□□ 0.66
CNN1-209ENST00000592338 CCNA1P78396 465 aa19.17■□□□□ 0.66
CNN1-209ENST00000592338 TRIM32Q13049 653 aa19.17■□□□□ 0.66
CNN1-209ENST00000592338 LRRC47Q8N1G4 583 aaKnown RBP19.17■□□□□ 0.66
CNN1-209ENST00000592338 TRIB2Q92519 343 aa19.17■□□□□ 0.66
CNN1-209ENST00000592338 NUDT12Q9BQG2 462 aa19.17■□□□□ 0.66
CNN1-209ENST00000592338 RNF208Q9H0X6 261 aa19.17■□□□□ 0.66
CNN1-209ENST00000592338 CWC22Q9HCG8 908 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms