RNA–Protein interactions for RNA: ENST00000590998.5

SBNO2-209, Transcript of strawberry notch homolog 2, humanhuman

TSL 4

Gene SBNO2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-209ENST00000590998 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
SBNO2-209ENST00000590998 SOX1O00570 391 aaPredicted RBP17.2■□□□□ 0.34
SBNO2-209ENST00000590998 ATP5JP18859 108 aa17.2■□□□□ 0.34
SBNO2-209ENST00000590998 CCNA1P78396 465 aa17.2■□□□□ 0.34
SBNO2-209ENST00000590998 LHX8Q68G74 356 aa17.2■□□□□ 0.34
SBNO2-209ENST00000590998 TRMT44Q8IYL2 757 aaKnown RBP17.2■□□□□ 0.34
SBNO2-209ENST00000590998 NPLOC4Q8TAT6 608 aa17.2■□□□□ 0.34
SBNO2-209ENST00000590998 HAUS7Q99871 368 aa17.2■□□□□ 0.34
SBNO2-209ENST00000590998 A0A0G2JMZ2 1700 aa17.19■□□□□ 0.34
SBNO2-209ENST00000590998 TANGO6Q9C0B7 1094 aa17.19■□□□□ 0.34
SBNO2-209ENST00000590998 SLC15A5A6NIM6 579 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 GRB14Q14449 540 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 SIAH1Q8IUQ4 282 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 SPICE1Q8N0Z3 855 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 LRCH3Q96II8 777 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 GDF15Q99988 308 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 MOV10L1Q9BXT6 1211 aaKnown RBP17.18■□□□□ 0.34
SBNO2-209ENST00000590998 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 PARP14Q460N5 1801 aa17.18■□□□□ 0.34
SBNO2-209ENST00000590998 USP17L12C9JPN9 530 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 USP17L21D6R901 530 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 GLRX3O76003 335 aaKnown RBP17.17■□□□□ 0.34
SBNO2-209ENST00000590998 CYP2C19P33261 490 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 ICA1Q05084 483 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
SBNO2-209ENST00000590998 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.17■□□□□ 0.342e-7■□□□□ 10.4
SBNO2-209ENST00000590998 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
SBNO2-209ENST00000590998 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 IVNS1ABPQ9Y6Y0 642 aa17.17■□□□□ 0.34
SBNO2-209ENST00000590998 COL6A1P12109 1028 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 CDK8P49336 464 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 COG2Q14746 738 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 UBE3CQ15386 1083 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 LRRC26Q2I0M4 334 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 C12orf60Q5U649 245 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 TRPV1Q8NER1 839 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
SBNO2-209ENST00000590998 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
SBNO2-209ENST00000590998 ZNF236Q9UL36 1845 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 FLOT1O75955 427 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 HOXC6P09630 235 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 ERCC3P19447 782 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 ADORA2AP29274 412 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 CNGA1P29973 690 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 DSG3P32926 999 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 MAGEA10P43363 369 aaPredicted RBP17.15■□□□□ 0.34
SBNO2-209ENST00000590998 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
SBNO2-209ENST00000590998 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
SBNO2-209ENST00000590998 A0A1W2PPC1 479 aa17.14■□□□□ 0.33
SBNO2-209ENST00000590998 PLS1Q14651 629 aa17.14■□□□□ 0.33
SBNO2-209ENST00000590998 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
SBNO2-209ENST00000590998 STK11IPQ8N1F8 1099 aa17.14■□□□□ 0.33
SBNO2-209ENST00000590998 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
SBNO2-209ENST00000590998 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.33
SBNO2-209ENST00000590998 DDX20Q9UHI6 824 aaKnown RBP17.14■□□□□ 0.33
SBNO2-209ENST00000590998 COBLO75128 1261 aa17.13■□□□□ 0.33
SBNO2-209ENST00000590998 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
SBNO2-209ENST00000590998 DPP9Q86TI2 863 aa17.13■□□□□ 0.33
SBNO2-209ENST00000590998 NCAPG2Q86XI2 1143 aa17.13■□□□□ 0.33
SBNO2-209ENST00000590998 FBXO28Q9NVF7 368 aa17.13■□□□□ 0.33
SBNO2-209ENST00000590998 ZNFX1Q9P2E3 1918 aaKnown RBP17.13■□□□□ 0.33
SBNO2-209ENST00000590998 GREB1LQ9C091 1923 aaPredicted RBP17.12■□□□□ 0.33
SBNO2-209ENST00000590998 IGHA2P01877 340 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 CYBAP13498 195 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
SBNO2-209ENST00000590998 BMP8BP34820 402 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 SHCBP1Q8NEM2 672 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 LPAR1Q92633 364 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
SBNO2-209ENST00000590998 SENP6Q9GZR1 1112 aaPredicted RBP17.12■□□□□ 0.33
SBNO2-209ENST00000590998 WDR46O15213 610 aaKnown RBP17.11■□□□□ 0.33
SBNO2-209ENST00000590998 ATN1P54259 1190 aaPredicted RBP17.11■□□□□ 0.33
SBNO2-209ENST00000590998 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
SBNO2-209ENST00000590998 PRAMEF19Q5SWL8 479 aa17.11■□□□□ 0.33
SBNO2-209ENST00000590998 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
SBNO2-209ENST00000590998 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
SBNO2-209ENST00000590998 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.11■□□□□ 0.33
SBNO2-209ENST00000590998 SH2D4AQ9H788 454 aa17.11■□□□□ 0.33
SBNO2-209ENST00000590998 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
SBNO2-209ENST00000590998 RAD21O60216 631 aa17.1■□□□□ 0.33
SBNO2-209ENST00000590998 MDM2Q00987 491 aaPredicted RBP17.1■□□□□ 0.33
SBNO2-209ENST00000590998 GJC2Q5T442 439 aaPredicted RBP17.1■□□□□ 0.33
SBNO2-209ENST00000590998 OLFML2BQ68BL8 750 aa17.1■□□□□ 0.33
SBNO2-209ENST00000590998 MB21D1Q8N884 522 aa17.1■□□□□ 0.33
SBNO2-209ENST00000590998 OSBP2Q969R2 916 aa17.1■□□□□ 0.33
SBNO2-209ENST00000590998 STRBPQ96SI9 672 aaKnown RBP17.1■□□□□ 0.33
SBNO2-209ENST00000590998 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
SBNO2-209ENST00000590998 SMCHD1A6NHR9 2005 aa17.09■□□□□ 0.33
SBNO2-209ENST00000590998 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
SBNO2-209ENST00000590998 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms