RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NECAB2Q7Z6G3 386 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 PLEKHH3Q7Z736 793 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 PAWRQ96IZ0 340 aaKnown RBP21.56■■□□□ 1.04
VAT1-208ENST00000590924 ARMT1Q9H993 441 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 SWAP70Q9UH65 585 aa21.56■■□□□ 1.04
VAT1-208ENST00000590924 RANBP2P49792 3224 aaKnown RBP21.56■■□□□ 1.04
VAT1-208ENST00000590924 GREB1LQ9C091 1923 aaPredicted RBP21.55■■□□□ 1.04
VAT1-208ENST00000590924 PRKAR2AP13861 404 aaKnown RBP21.55■■□□□ 1.04
VAT1-208ENST00000590924 ZKSCAN1P17029 563 aaPredicted RBP21.55■■□□□ 1.04
VAT1-208ENST00000590924 RGS2P41220 211 aa21.55■■□□□ 1.04
VAT1-208ENST00000590924 PLEKHM2Q8IWE5 1019 aa21.55■■□□□ 1.04
VAT1-208ENST00000590924 PI4K2BQ8TCG2 481 aa21.55■■□□□ 1.04
VAT1-208ENST00000590924 APBA2Q99767 749 aa21.55■■□□□ 1.04
VAT1-208ENST00000590924 ATP8A2Q9NTI2 1148 aa21.55■■□□□ 1.04
VAT1-208ENST00000590924 EVI5O60447 810 aa21.54■■□□□ 1.04
VAT1-208ENST00000590924 MBD4O95243 580 aa21.54■■□□□ 1.04
VAT1-208ENST00000590924 TMEM179Q6ZVK1 233 aa21.54■■□□□ 1.04
VAT1-208ENST00000590924 DIS3LQ8TF46 1054 aaKnown RBP21.54■■□□□ 1.04
VAT1-208ENST00000590924 PRO3102Q9H379 93 aa21.54■■□□□ 1.04
VAT1-208ENST00000590924 RPAP3Q9H6T3 665 aaPredicted RBP21.54■■□□□ 1.04
VAT1-208ENST00000590924 SPDYE16A6NNV3 312 aaPredicted RBP21.53■■□□□ 1.04
VAT1-208ENST00000590924 MPHOSPH10O00566 681 aaKnown RBP21.53■■□□□ 1.04
VAT1-208ENST00000590924 CYP2D6P10635 497 aa21.53■■□□□ 1.04
VAT1-208ENST00000590924 UBE3CQ15386 1083 aa21.53■■□□□ 1.04
VAT1-208ENST00000590924 SLFNL1Q499Z3 407 aa21.53■■□□□ 1.04
VAT1-208ENST00000590924 SLC44A5Q8NCS7 719 aa21.53■■□□□ 1.04
VAT1-208ENST00000590924 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
VAT1-208ENST00000590924 RBM27Q9P2N5 1060 aaKnown RBP21.53■■□□□ 1.04
VAT1-208ENST00000590924 OGDHLQ9ULD0 1010 aa21.53■■□□□ 1.04
VAT1-208ENST00000590924 A0A1W2PRG0 241 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 PRKAB2O43741 272 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 PDE4AP27815 886 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 MAP2K5Q13163 448 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 TICAM2Q86XR7 235 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 BTBD7Q9P203 1132 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 MYH4Q9Y623 1939 aa21.52■■□□□ 1.04
VAT1-208ENST00000590924 MNX1P50219 401 aaPredicted RBP21.51■■□□□ 1.03
VAT1-208ENST00000590924 CACNB2Q08289 660 aaPredicted RBP21.51■■□□□ 1.03
VAT1-208ENST00000590924 CCL14Q16627 93 aa21.51■■□□□ 1.03
VAT1-208ENST00000590924 ZSCAN25Q6NSZ9 544 aa21.51■■□□□ 1.03
VAT1-208ENST00000590924 NBPF3Q9H094 633 aa21.51■■□□□ 1.03
VAT1-208ENST00000590924 PLXNA1Q9UIW2 1896 aa21.51■■□□□ 1.03
VAT1-208ENST00000590924 SLC15A5A6NIM6 579 aa21.5■■□□□ 1.03
VAT1-208ENST00000590924 PTPREP23469 700 aa21.5■■□□□ 1.03
VAT1-208ENST00000590924 C12orf60Q5U649 245 aa21.5■■□□□ 1.03
VAT1-208ENST00000590924 TSHZ3Q63HK5 1081 aa21.5■■□□□ 1.03
VAT1-208ENST00000590924 AMOTL1Q8IY63 956 aa21.5■■□□□ 1.03
VAT1-208ENST00000590924 DYNLL2Q96FJ2 89 aa21.5■■□□□ 1.03
VAT1-208ENST00000590924 CHGBP05060 677 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 GRB14Q14449 540 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 COG2Q14746 738 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 LPAR1Q92633 364 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 DDRGK1Q96HY6 314 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 CCDC17Q96LX7 622 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 IVNS1ABPQ9Y6Y0 642 aa21.49■■□□□ 1.03
VAT1-208ENST00000590924 USP17L12C9JPN9 530 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 USP17L21D6R901 530 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 HOXC6P09630 235 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 AKR1B1P15121 316 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 WDR78Q5VTH9 848 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 C16orf86Q6ZW13 317 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 KBTBD3Q8NAB2 608 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 TANGO6Q9C0B7 1094 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 C11orf49Q9H6J7 331 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 HOXC10Q9NYD6 342 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 TMX2Q9Y320 296 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 SZT2Q5T011 3432 aa21.48■■□□□ 1.03
VAT1-208ENST00000590924 CYP2D7A0A087X1C5 515 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 CCND3P30281 292 aaPredicted RBP21.47■■□□□ 1.03
VAT1-208ENST00000590924 CDK8P49336 464 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 ICA1Q05084 483 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 LRRFIP1Q32MZ4 808 aaKnown RBP21.47■■□□□ 1.03
VAT1-208ENST00000590924 KIAA1755Q5JYT7 1200 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 SIAH1Q8IUQ4 282 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 EVI5LQ96CN4 794 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 PUS7LQ9H0K6 701 aaKnown RBP21.47■■□□□ 1.03
VAT1-208ENST00000590924 SH2D4AQ9H788 454 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 SLC4A4Q9Y6R1 1079 aa21.47■■□□□ 1.03
VAT1-208ENST00000590924 A0A1W2PPC1 479 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 SMIM22K7EJ46 135 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 MFSD14CQ5VZR4 134 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 LHX8Q68G74 356 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 CLEC10AQ8IUN9 316 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 MB21D1Q8N884 522 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 VCPKMTQ9H867 229 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 FLRT1Q9NZU1 646 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 SMCHD1A6NHR9 2005 aa21.46■■□□□ 1.03
VAT1-208ENST00000590924 C7orf61Q8IZ16 206 aa21.45■■□□□ 1.02
VAT1-208ENST00000590924 SHCBP1Q8NEM2 672 aa21.45■■□□□ 1.02
VAT1-208ENST00000590924 MOV10L1Q9BXT6 1211 aaKnown RBP21.45■■□□□ 1.02
VAT1-208ENST00000590924 SPATC1LQ9H0A9 340 aa21.45■■□□□ 1.02
VAT1-208ENST00000590924 ARPP21Q9UBL0 812 aaPredicted RBP21.45■■□□□ 1.02
VAT1-208ENST00000590924 PFASO15067 1338 aa21.45■■□□□ 1.02
VAT1-208ENST00000590924 ZFYP08048 801 aaPredicted RBP21.44■■□□□ 1.02
VAT1-208ENST00000590924 DSG3P32926 999 aa21.44■■□□□ 1.02
VAT1-208ENST00000590924 CTR9Q6PD62 1173 aa21.44■■□□□ 1.02
VAT1-208ENST00000590924 NPLOC4Q8TAT6 608 aa21.44■■□□□ 1.02
VAT1-208ENST00000590924 WDR46O15213 610 aaKnown RBP21.43■■□□□ 1.02
VAT1-208ENST00000590924 STRNO43815 780 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms