RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
GHDC-211ENST00000590520 SHCBP1Q8NEM2 672 aa18.33■□□□□ 0.52
GHDC-211ENST00000590520 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.52
GHDC-211ENST00000590520 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.52
GHDC-211ENST00000590520 ATP11BQ9Y2G3 1177 aa18.33■□□□□ 0.52
GHDC-211ENST00000590520 CCER2I3L3R5 266 aa18.32■□□□□ 0.52
GHDC-211ENST00000590520 STRNO43815 780 aa18.32■□□□□ 0.52
GHDC-211ENST00000590520 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
GHDC-211ENST00000590520 GABPAQ06546 454 aa18.32■□□□□ 0.52
GHDC-211ENST00000590520 GJC2Q5T442 439 aaPredicted RBP18.32■□□□□ 0.52
GHDC-211ENST00000590520 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
GHDC-211ENST00000590520 TANGO6Q9C0B7 1094 aa18.32■□□□□ 0.52
GHDC-211ENST00000590520 SPATC1LQ9H0A9 340 aa18.32■□□□□ 0.52
GHDC-211ENST00000590520 SPTBN5Q9NRC6 3674 aaKnown RBP18.32■□□□□ 0.52
GHDC-211ENST00000590520 MAGEB6P1A0A0J9YX57 407 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
GHDC-211ENST00000590520 SEPT4O43236 478 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 COG2Q14746 738 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 MB21D1Q8N884 522 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 CRNKL1Q9BZJ0 848 aaKnown RBP18.31■□□□□ 0.52
GHDC-211ENST00000590520 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
GHDC-211ENST00000590520 SLC5A4Q9NY91 659 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 HOXC10Q9NYD6 342 aa18.31■□□□□ 0.52
GHDC-211ENST00000590520 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
GHDC-211ENST00000590520 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
GHDC-211ENST00000590520 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
GHDC-211ENST00000590520 ERCC3P19447 782 aa18.3■□□□□ 0.52
GHDC-211ENST00000590520 SNX17Q15036 470 aa18.3■□□□□ 0.52
GHDC-211ENST00000590520 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
GHDC-211ENST00000590520 AACSQ86V21 672 aa18.3■□□□□ 0.52
GHDC-211ENST00000590520 MCM9Q9NXL9 1143 aa18.3■□□□□ 0.52
GHDC-211ENST00000590520 PLXNA1Q9UIW2 1896 aa18.3■□□□□ 0.52
GHDC-211ENST00000590520 BAZ2AQ9UIF9 1905 aaKnown RBP18.29■□□□□ 0.52
GHDC-211ENST00000590520 TRIM60Q495X7 471 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 ANO1Q5XXA6 986 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 SLC39A5Q6ZMH5 540 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 TMEM179Q6ZVK1 233 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 ABRAQ8N0Z2 381 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 MROH8Q9H579 483 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 PDLIM7Q9NR12 457 aa18.29■□□□□ 0.52
GHDC-211ENST00000590520 PDE6AP16499 860 aa18.28■□□□□ 0.52
GHDC-211ENST00000590520 SHHQ15465 462 aa18.28■□□□□ 0.52
GHDC-211ENST00000590520 CEP85Q6P2H3 762 aa18.28■□□□□ 0.52
GHDC-211ENST00000590520 EXOC6BQ9Y2D4 811 aa18.28■□□□□ 0.52
GHDC-211ENST00000590520 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
GHDC-211ENST00000590520 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
GHDC-211ENST00000590520 COBLO75128 1261 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 FLOT1O75955 427 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
GHDC-211ENST00000590520 DSG3P32926 999 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 EVX2Q03828 476 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 PLS1Q14651 629 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 LRRC41Q15345 812 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 C9orf50Q5SZB4 431 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 SLC9C2Q5TAH2 1124 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 C1orf53Q5VUE5 145 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 SH2D4AQ9H788 454 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 ARHGEF10LQ9HCE6 1279 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
GHDC-211ENST00000590520 MYH7P12883 1935 aa18.27■□□□□ 0.51
GHDC-211ENST00000590520 TTC28Q96AY4 2481 aa18.27■□□□□ 0.51
GHDC-211ENST00000590520 SMAD3P84022 425 aaKnown RBP18.26■□□□□ 0.51
GHDC-211ENST00000590520 ICA1Q05084 483 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 SLC44A5Q8NCS7 719 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 BADQ92934 168 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 ATG4CQ96DT6 458 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 MAML3Q96JK9 1138 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 CDX2Q99626 313 aaPredicted RBP18.26■□□□□ 0.51
GHDC-211ENST00000590520 DCP1AQ9NPI6 582 aaPredicted RBP18.26■□□□□ 0.51
GHDC-211ENST00000590520 NRBP1Q9UHY1 535 aa18.26■□□□□ 0.51
GHDC-211ENST00000590520 ZNF532Q9HCE3 1301 aa18.25■□□□□ 0.51
GHDC-211ENST00000590520 RLBP1P12271 317 aa18.25■□□□□ 0.51
GHDC-211ENST00000590520 ADCYAP1R1P41586 468 aa18.25■□□□□ 0.51
GHDC-211ENST00000590520 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
GHDC-211ENST00000590520 LCORLQ8N3X6 602 aa18.25■□□□□ 0.51
GHDC-211ENST00000590520 MAFAQ8NHW3 353 aaPredicted RBP18.25■□□□□ 0.51
GHDC-211ENST00000590520 SDR42E1Q8WUS8 393 aa18.25■□□□□ 0.51
GHDC-211ENST00000590520 WDR46O15213 610 aaKnown RBP18.24■□□□□ 0.51
GHDC-211ENST00000590520 SLC25A27O95847 323 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 CYP2D6P10635 497 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 FCER1AP12319 257 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 PRAMEF19Q5SWL8 479 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 CLEC10AQ8IUN9 316 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.24■□□□□ 0.51
GHDC-211ENST00000590520 FERMT2Q96AC1 680 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 SEMA6BQ9H3T3 888 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 PHF24Q9UPV7 400 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 TMX2Q9Y320 296 aa18.24■□□□□ 0.51
GHDC-211ENST00000590520 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
GHDC-211ENST00000590520 TRIM43BA6NCK2 446 aa18.23■□□□□ 0.51
GHDC-211ENST00000590520 RARBP10826 455 aa18.23■□□□□ 0.51
GHDC-211ENST00000590520 AKR1B1P15121 316 aa18.23■□□□□ 0.51
GHDC-211ENST00000590520 SH3RF1Q7Z6J0 888 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms