RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 DGKHQ86XP1 1220 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 SPICE1Q8N0Z3 855 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 PHKBQ93100 1093 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
ZNF397-208ENST00000590470 GPCPD1Q9NPB8 672 aa10.95□□□□□ -0.66
ZNF397-208ENST00000590470 SH2B1Q9NRF2 756 aaPredicted RBP10.95□□□□□ -0.66
ZNF397-208ENST00000590470 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 GJB2P29033 226 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 PKP1Q13835 747 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 VGLL4Q14135 290 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
ZNF397-208ENST00000590470 TTBK2Q6IQ55 1244 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
ZNF397-208ENST00000590470 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 FANCBQ8NB91 859 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
ZNF397-208ENST00000590470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.66
ZNF397-208ENST00000590470 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
ZNF397-208ENST00000590470 KLRG1Q96E93 195 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 AIFM3Q96NN9 605 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 KANSL2Q9H9L4 492 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 ELP3Q9H9T3 547 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
ZNF397-208ENST00000590470 ZNF112Q9UJU3 913 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 SMC3Q9UQE7 1217 aa10.94□□□□□ -0.66
ZNF397-208ENST00000590470 CTNND1O60716 968 aaKnown RBP10.93□□□□□ -0.66
ZNF397-208ENST00000590470 NOVP48745 357 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 SNAP25P60880 206 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 GRM4Q14833 912 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 CCDC96Q2M329 555 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 SLC35G1Q2M3R5 365 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
ZNF397-208ENST00000590470 KCTD1Q719H9 257 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 SCYL3Q8IZE3 742 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
ZNF397-208ENST00000590470 MTA3Q9BTC8 594 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 UBA5Q9GZZ9 404 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 VAT1LQ9HCJ6 419 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 GJB4Q9NTQ9 266 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 NYAP2Q9P242 653 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 SNCAIPQ9Y6H5 919 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 TRPM7Q96QT4 1865 aa10.93□□□□□ -0.66
ZNF397-208ENST00000590470 BAZ2BQ9UIF8 2168 aaKnown RBP10.92□□□□□ -0.66
ZNF397-208ENST00000590470 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 F5H6K3 240 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 KIF3CO14782 793 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 CPLX1O14810 134 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 DDAH1O94760 285 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 NDUFB10O96000 172 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 ASNSP08243 561 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 PDHBP11177 359 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 FDPSP14324 419 aaKnown RBP10.92□□□□□ -0.66
ZNF397-208ENST00000590470 PTPRAP18433 802 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 SLC16A2P36021 539 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 MAP3K9P80192 1104 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 GUCY1B3Q02153 619 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 KLRC3Q07444 240 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 SPP2Q13103 211 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 NTRK3Q16288 839 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 CCDC178Q5BJE1 867 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 SLFN13Q68D06 897 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 OTUD7BQ6GQQ9 843 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 CTCFLQ8NI51 663 aaPredicted RBP10.92□□□□□ -0.66
ZNF397-208ENST00000590470 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 FEZ1Q99689 392 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 PICK1Q9NRD5 415 aa10.92□□□□□ -0.66
ZNF397-208ENST00000590470 CELF2O95319 508 aaKnown RBP10.91□□□□□ -0.66
ZNF397-208ENST00000590470 ITGBL1O95965 494 aaPredicted RBP10.91□□□□□ -0.66
ZNF397-208ENST00000590470 PARP1P09874 1014 aaKnown RBP10.91□□□□□ -0.66
ZNF397-208ENST00000590470 TAL1P17542 331 aaPredicted RBP10.91□□□□□ -0.66
ZNF397-208ENST00000590470 NF2P35240 595 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
ZNF397-208ENST00000590470 MTMR2Q13614 643 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 CST9Q5W186 159 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 TMTC3Q6ZXV5 915 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 SMARCC2Q8TAQ2 1214 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 MKL1Q969V6 931 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 ZHX2Q9Y6X8 837 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 PTPRFP10586 1907 aa10.91□□□□□ -0.66
ZNF397-208ENST00000590470 NID2Q14112 1375 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CNTNAP5Q8WYK1 1306 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 PALM3A6NDB9 673 aaPredicted RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 KLRF2D3W0D1 207 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CYTH3O43739 400 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 PPP1R12BO60237 982 aaPredicted RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CALM1P0DP23 149 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CALM2P0DP24 149 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CALM3P0DP25 149 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 IREB2P48200 963 aaKnown RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 ZNF543Q08ER8 600 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 FUT2Q10981 343 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms