RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CNMDO75829 334 aa21.5■■□□□ 1.03
CIRBP-227ENST00000590188 CCAR1Q8IX12 1150 aaKnown RBP21.5■■□□□ 1.03
CIRBP-227ENST00000590188 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.5■■□□□ 1.03
CIRBP-227ENST00000590188 PORCNQ9H237 461 aa21.5■■□□□ 1.03
CIRBP-227ENST00000590188 TMX2Q9Y320 296 aa21.5■■□□□ 1.03
CIRBP-227ENST00000590188 SPDYE16A6NNV3 312 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-227ENST00000590188 FOXP2O15409 715 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 PPARAQ07869 468 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 SLAIN1Q8ND83 568 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 GTF3C2Q8WUA4 911 aaPredicted RBP21.49■■□□□ 1.03
CIRBP-227ENST00000590188 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 VCPKMTQ9H867 229 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 KANSL2Q9H9L4 492 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
CIRBP-227ENST00000590188 HELLSQ9NRZ9 838 aa21.49■■□□□ 1.03
CIRBP-227ENST00000590188 CTDSPL2Q05D32 466 aa21.48■■□□□ 1.03
CIRBP-227ENST00000590188 WDR78Q5VTH9 848 aa21.48■■□□□ 1.03
CIRBP-227ENST00000590188 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
CIRBP-227ENST00000590188 BTBD7Q9P203 1132 aa21.48■■□□□ 1.03
CIRBP-227ENST00000590188 DOCK3Q8IZD9 2030 aa21.48■■□□□ 1.03
CIRBP-227ENST00000590188 CYP2B6P20813 491 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 PDE4AP27815 886 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 UBXN2AP68543 259 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 MCMDC2Q4G0Z9 681 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 FAM47AQ5JRC9 791 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 ZNF589Q86UQ0 364 aaPredicted RBP21.47■■□□□ 1.03
CIRBP-227ENST00000590188 OSBPL3Q9H4L5 887 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 RABGAP1Q9Y3P9 1069 aa21.47■■□□□ 1.03
CIRBP-227ENST00000590188 FLOT1O75955 427 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 INHAP05111 366 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 CCL5P13501 91 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 IRF5Q13568 498 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 LPAR1Q92633 364 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 ZNF287Q9HBT7 754 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 INCENPQ9NQS7 918 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 GJD2Q9UKL4 321 aa21.46■■□□□ 1.03
CIRBP-227ENST00000590188 SLC3A2P08195 630 aaKnown RBP21.45■■□□□ 1.02
CIRBP-227ENST00000590188 SDSP20132 328 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 MAPK4P31152 587 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 PDE4BQ07343 736 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 COG2Q14746 738 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 GPR142Q7Z601 462 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 RNF208Q9H0X6 261 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 UNC93B1Q9H1C4 597 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 CLIP2Q9UDT6 1046 aa21.45■■□□□ 1.02
CIRBP-227ENST00000590188 GREB1LQ9C091 1923 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-227ENST00000590188 RBBP6Q7Z6E9 1792 aaKnown RBP21.44■■□□□ 1.02
CIRBP-227ENST00000590188 WDR46O15213 610 aaKnown RBP21.44■■□□□ 1.02
CIRBP-227ENST00000590188 FAM83BQ5T0W9 1011 aa21.44■■□□□ 1.02
CIRBP-227ENST00000590188 PLEKHH3Q7Z736 793 aa21.44■■□□□ 1.02
CIRBP-227ENST00000590188 PXYLP1Q8TE99 480 aa21.44■■□□□ 1.02
CIRBP-227ENST00000590188 ATG4CQ96DT6 458 aa21.44■■□□□ 1.02
CIRBP-227ENST00000590188 NUP88Q99567 741 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-227ENST00000590188 NUDT12Q9BQG2 462 aa21.44■■□□□ 1.02
CIRBP-227ENST00000590188 BRCA2P51587 3418 aa21.44■■□□□ 1.02
CIRBP-227ENST00000590188 TSPY3P0CV98 308 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 TSPY8P0CW00 308 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 DSG3P32926 999 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 CCNA1P78396 465 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 TFAP4Q01664 338 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 TRIM32Q13049 653 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 CWC27Q6UX04 472 aaKnown RBP21.43■■□□□ 1.02
CIRBP-227ENST00000590188 LBX2Q6XYB7 198 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 CEP95Q96GE4 821 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 FBXO28Q9NVF7 368 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 HOXC10Q9NYD6 342 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 TACC3Q9Y6A5 838 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 CCDC171Q6TFL3 1326 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 PLXNB2O15031 1838 aa21.43■■□□□ 1.02
CIRBP-227ENST00000590188 IGKV6D-41A0A0C4DH26 115 aa21.42■■□□□ 1.02
CIRBP-227ENST00000590188 HSPD1P10809 573 aaKnown RBP21.42■■□□□ 1.02
CIRBP-227ENST00000590188 PLS1Q14651 629 aa21.42■■□□□ 1.02
CIRBP-227ENST00000590188 KIAA0100Q14667 2235 aaKnown RBP21.42■■□□□ 1.02
CIRBP-227ENST00000590188 LRRC47Q8N1G4 583 aaKnown RBP21.42■■□□□ 1.02
CIRBP-227ENST00000590188 CHMP4CQ96CF2 233 aa21.42■■□□□ 1.02
CIRBP-227ENST00000590188 TOMM22Q9NS69 142 aa21.42■■□□□ 1.02
CIRBP-227ENST00000590188 DIAPH3Q9NSV4 1193 aa21.42■■□□□ 1.02
CIRBP-227ENST00000590188 NYAP2Q9P242 653 aa21.42■■□□□ 1.02
CIRBP-227ENST00000590188 FGAP02671 866 aa21.41■■□□□ 1.02
CIRBP-227ENST00000590188 HAND2P61296 217 aa21.41■■□□□ 1.02
CIRBP-227ENST00000590188 SOCS4Q8WXH5 440 aa21.41■■□□□ 1.02
CIRBP-227ENST00000590188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.41■■□□□ 1.02
CIRBP-227ENST00000590188 TSPY2A6NKD2 308 aa21.4■■□□□ 1.02
CIRBP-227ENST00000590188 NDUFB10O96000 172 aa21.4■■□□□ 1.02
CIRBP-227ENST00000590188 RRP12Q5JTH9 1297 aaKnown RBP21.4■■□□□ 1.02
CIRBP-227ENST00000590188 NEDD1Q8NHV4 660 aa21.4■■□□□ 1.02
CIRBP-227ENST00000590188 TRIB2Q92519 343 aa21.4■■□□□ 1.02
CIRBP-227ENST00000590188 SHISA4Q96DD7 197 aa21.4■■□□□ 1.02
CIRBP-227ENST00000590188 MOV10L1Q9BXT6 1211 aaKnown RBP21.4■■□□□ 1.02
CIRBP-227ENST00000590188 MTMR4Q9NYA4 1195 aa21.4■■□□□ 1.02
CIRBP-227ENST00000590188 RLFQ13129 1914 aa21.39■■□□□ 1.02
CIRBP-227ENST00000590188 F5H6K3 240 aa21.39■■□□□ 1.01
CIRBP-227ENST00000590188 RANBP6O60518 1105 aaKnown RBP21.39■■□□□ 1.01
CIRBP-227ENST00000590188 HMGCRP04035 888 aa21.39■■□□□ 1.01
CIRBP-227ENST00000590188 GSPT1P15170 499 aaKnown RBP21.39■■□□□ 1.01
CIRBP-227ENST00000590188 RGS2P41220 211 aa21.39■■□□□ 1.01
CIRBP-227ENST00000590188 KLRC3Q07444 240 aa21.39■■□□□ 1.01
CIRBP-227ENST00000590188 ALX1Q15699 326 aa21.39■■□□□ 1.01
CIRBP-227ENST00000590188 CCL14Q16627 93 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms