RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 RASA1P20936 1047 aa18■□□□□ 0.47
NFIX-212ENST00000590027 MAPK4P31152 587 aa18■□□□□ 0.47
NFIX-212ENST00000590027 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
NFIX-212ENST00000590027 LBX2Q6XYB7 198 aa18■□□□□ 0.47
NFIX-212ENST00000590027 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
NFIX-212ENST00000590027 RWDD1Q9H446 243 aaPredicted RBP18■□□□□ 0.47
NFIX-212ENST00000590027 SH2D4AQ9H788 454 aa18■□□□□ 0.47
NFIX-212ENST00000590027 VCPKMTQ9H867 229 aa18■□□□□ 0.47
NFIX-212ENST00000590027 TMX2Q9Y320 296 aa18■□□□□ 0.47
NFIX-212ENST00000590027 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
NFIX-212ENST00000590027 IGHDP01880 384 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
NFIX-212ENST00000590027 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 IFNL3Q8IZI9 196 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 SPICE1Q8N0Z3 855 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 SOCS4Q8WXH5 440 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 EVI5LQ96CN4 794 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 BTBD7Q9P203 1132 aa17.99■□□□□ 0.47
NFIX-212ENST00000590027 COL11A1P12107 1806 aaPredicted RBP17.98■□□□□ 0.47
NFIX-212ENST00000590027 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
NFIX-212ENST00000590027 HMGCRP04035 888 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 GJB1P08034 283 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 PRPF38BQ5VTL8 546 aaKnown RBP17.98■□□□□ 0.47
NFIX-212ENST00000590027 CCAR1Q8IX12 1150 aaKnown RBP17.98■□□□□ 0.47
NFIX-212ENST00000590027 LPAR1Q92633 364 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
NFIX-212ENST00000590027 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
NFIX-212ENST00000590027 ZNF236Q9UL36 1845 aa17.98■□□□□ 0.47
NFIX-212ENST00000590027 WDR46O15213 610 aaKnown RBP17.97■□□□□ 0.47
NFIX-212ENST00000590027 FOXP2O15409 715 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 CYP2B6P20813 491 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 GJA8P48165 433 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 CCNA1P78396 465 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 TRIM32Q13049 653 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 PLEKHH3Q7Z736 793 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 NKX2-3Q8TAU0 364 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 TRIB2Q92519 343 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 NACAP1Q9BZK3 213 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 NAPBQ9H115 298 aa17.97■□□□□ 0.47
NFIX-212ENST00000590027 PRDM1O75626 825 aa17.96■□□□□ 0.47
NFIX-212ENST00000590027 MORN1Q5T089 497 aa17.96■□□□□ 0.47
NFIX-212ENST00000590027 WDR78Q5VTH9 848 aa17.96■□□□□ 0.47
NFIX-212ENST00000590027 CHD1LQ86WJ1 897 aa17.96■□□□□ 0.47
NFIX-212ENST00000590027 U2AF1L4Q8WU68 220 aaKnown RBP17.96■□□□□ 0.47
NFIX-212ENST00000590027 A0A0D9SFI3 127 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 FLOT1O75955 427 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 NUCB1Q02818 461 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 PPARAQ07869 468 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 COG2Q14746 738 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 SAMD1Q6SPF0 538 aaPredicted RBP17.95■□□□□ 0.46
NFIX-212ENST00000590027 USP6NLQ92738 828 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 ATG4CQ96DT6 458 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 APBA2Q99767 749 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.95■□□□□ 0.46
NFIX-212ENST00000590027 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
NFIX-212ENST00000590027 PAK6Q9NQU5 681 aaPredicted RBP17.95■□□□□ 0.46
NFIX-212ENST00000590027 PLIN4Q96Q06 1357 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 RAD21O60216 631 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 DSG3P32926 999 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 RGS2P41220 211 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
NFIX-212ENST00000590027 VPS53Q5VIR6 699 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 FAM227BQ96M60 508 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 DEFB118Q96PH6 123 aa17.94■□□□□ 0.46
NFIX-212ENST00000590027 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 TRIM6-TRIM34B2RNG4 842 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
NFIX-212ENST00000590027 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
NFIX-212ENST00000590027 CCL14Q16627 93 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 PLEKHM2Q8IWE5 1019 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 MOV10L1Q9BXT6 1211 aaKnown RBP17.93■□□□□ 0.46
NFIX-212ENST00000590027 SPATC1LQ9H0A9 340 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 ZNF287Q9HBT7 754 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 HELLSQ9NRZ9 838 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 FBXO28Q9NVF7 368 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 HOXC10Q9NYD6 342 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 NYAP2Q9P242 653 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 FRMPD3Q5JV73 1810 aa17.93■□□□□ 0.46
NFIX-212ENST00000590027 FARP2O94887 1054 aaPredicted RBP17.92■□□□□ 0.46
NFIX-212ENST00000590027 SGPL1O95470 568 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
NFIX-212ENST00000590027 PTPREP23469 700 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 PDE4BQ07343 736 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 MAP2K5Q13163 448 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 NMIQ13287 307 aaPredicted RBP17.92■□□□□ 0.46
NFIX-212ENST00000590027 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 ZNF444Q8N0Y2 327 aaPredicted RBP17.92■□□□□ 0.46
NFIX-212ENST00000590027 MB21D1Q8N884 522 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
NFIX-212ENST00000590027 SLC15A5A6NIM6 579 aa17.91■□□□□ 0.46
NFIX-212ENST00000590027 SLC3A2P08195 630 aaKnown RBP17.91■□□□□ 0.46
NFIX-212ENST00000590027 GRB14Q14449 540 aa17.91■□□□□ 0.46
NFIX-212ENST00000590027 PLS1Q14651 629 aa17.91■□□□□ 0.46
NFIX-212ENST00000590027 MAP3K21Q5TCX8 1036 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms