RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 GREM2Q9H772 168 aa7.1□□□□□ -1.27
LINC01539-202ENST00000589293 ANGEL1Q9UNK9 670 aaKnown RBP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 SCAF8Q9UPN6 1271 aaKnown RBP7.1□□□□□ -1.27
LINC01539-202ENST00000589293 POLR2AP24928 1970 aaKnown RBP7.09□□□□□ -1.27
LINC01539-202ENST00000589293 MAN1A2O60476 641 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 THBS1P07996 1170 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 ZNF853P0CG23 659 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 ITGA6P23229 1130 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 NOS2P35228 1153 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 PLA2G4AP47712 749 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 IREB2P48200 963 aaKnown RBP7.09□□□□□ -1.27
LINC01539-202ENST00000589293 TM4SF4P48230 202 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 PSMA6P60900 246 aaKnown RBP7.09□□□□□ -1.27
LINC01539-202ENST00000589293 TWISTNBQ3B726 338 aaPredicted RBP7.09□□□□□ -1.27
LINC01539-202ENST00000589293 NOM1Q5C9Z4 860 aaKnown RBP7.09□□□□□ -1.27
LINC01539-202ENST00000589293 DACT2Q5SW24 774 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 MOB2Q70IA6 237 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 C8orf58Q8NAV2 365 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 GMLQ99445 158 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 VEZTQ9HBM0 779 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 SENP2Q9HC62 589 aa7.09□□□□□ -1.27
LINC01539-202ENST00000589293 NEURL1BA8MQ27 555 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 PTSQ03393 145 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 PTPN12Q05209 780 aaKnown RBP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 IFIT5Q13325 482 aaKnown RBP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 TNFAIP1Q13829 316 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 CWF19L2Q2TBE0 894 aaKnown RBP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 INTS3Q68E01 1043 aaKnown RBP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 STAG2Q8N3U4 1231 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 C1orf216Q8TAB5 229 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 ERO1AQ96HE7 468 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 MKNK1Q9BUB5 465 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 MXD3Q9BW11 206 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 NIFKQ9BYG3 293 aaKnown RBP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 DEFB129Q9H1M3 183 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 PRKRIP1Q9H875 184 aaPredicted RBP7.08□□□□□ -1.28
LINC01539-202ENST00000589293 SEPT3Q9UH03 358 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 TRIM17Q9Y577 477 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
LINC01539-202ENST00000589293 PDE4DIPQ5VU43 2346 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 COL1A1P02452 1464 aaPredicted RBP7.07□□□□□ -1.28
LINC01539-202ENST00000589293 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 F8W031 263 aaPredicted RBP7.07□□□□□ -1.28
LINC01539-202ENST00000589293 PLIN1O60240 522 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 IGKV5-2P06315 115 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 ZBTB48P10074 688 aaPredicted RBP7.07□□□□□ -1.28
LINC01539-202ENST00000589293 CHRNDQ07001 517 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 GCKRQ14397 625 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 CCDC57Q2TAC2 916 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 DNAAF4Q8WXU2 420 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 TSR2Q969E8 191 aaKnown RBP7.07□□□□□ -1.28
LINC01539-202ENST00000589293 CNNM1Q9NRU3 951 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 CUEDC1Q9NWM3 386 aaPredicted RBP7.07□□□□□ -1.28
LINC01539-202ENST00000589293 SCN9AQ15858 1988 aa7.07□□□□□ -1.28
LINC01539-202ENST00000589293 SERTM1A2A2V5 107 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 UNCXA6NJT0 531 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 H7C1W4 665 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 FRAT2O75474 233 aaPredicted RBP7.06□□□□□ -1.28
LINC01539-202ENST00000589293 TNNI2P48788 182 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 CFAP100Q494V2 611 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 WDR44Q5JSH3 913 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 FAM26DQ5JW98 314 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 GNASQ5JWF2 1037 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 NBPF11Q86T75 865 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 VPS37DQ86XT2 251 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 ANKRD13AQ8IZ07 590 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 LINS1Q8NG48 757 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 PLA2G12BQ9BX93 195 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 CFHR5Q9BXR6 569 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 SAP130Q9H0E3 1048 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 CD209Q9NNX6 404 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 C9orf78Q9NZ63 289 aaPredicted RBP7.06□□□□□ -1.28
LINC01539-202ENST00000589293 HCN4Q9Y3Q4 1203 aa7.06□□□□□ -1.28
LINC01539-202ENST00000589293 CLRN2A0PK11 232 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 TAF5LO75529 589 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 KIF22Q14807 665 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 LDLRAD1Q5T700 205 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 LDHAL6AQ6ZMR3 332 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 TXNRD3Q86VQ6 643 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 TSPYL6Q8N831 410 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 HOOK2Q96ED9 719 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 WNK4Q96J92 1243 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 EFCC1Q9HA90 598 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 TIMMDC1Q9NPL8 285 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 TMOD2Q9NZR1 351 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 LRFN2Q9ULH4 789 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 CSADQ9Y600 493 aa7.05□□□□□ -1.28
LINC01539-202ENST00000589293 PSME4Q14997 1843 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 COL4A1P02462 1669 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 MYH3P11055 1940 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 WTIPA6NIX2 430 aaPredicted RBP7.04□□□□□ -1.28
LINC01539-202ENST00000589293 BRD1O95696 1058 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 CSF1RP07333 972 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
LINC01539-202ENST00000589293 MSX1P28360 303 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 FKBP1AP62942 108 aaKnown RBP7.04□□□□□ -1.28
LINC01539-202ENST00000589293 SP3Q02447 781 aa7.04□□□□□ -1.28
LINC01539-202ENST00000589293 UBAP2LQ14157 1087 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms