RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 CTDNEP1O95476 244 aa28.86■■■□□ 2.21
RFX1-205ENST00000589239 CALM1P0DP23 149 aa28.86■■■□□ 2.21
RFX1-205ENST00000589239 CALM2P0DP24 149 aa28.86■■■□□ 2.21
RFX1-205ENST00000589239 CALM3P0DP25 149 aa28.86■■■□□ 2.21
RFX1-205ENST00000589239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.86■■■□□ 2.21
RFX1-205ENST00000589239 MKL1Q969V6 931 aa28.86■■■□□ 2.21
RFX1-205ENST00000589239 A0A1W2PRG0 241 aa28.85■■■□□ 2.21
RFX1-205ENST00000589239 JAK2O60674 1132 aa28.85■■■□□ 2.21
RFX1-205ENST00000589239 ECE1P42892 770 aa28.85■■■□□ 2.21
RFX1-205ENST00000589239 SCYL3Q8IZE3 742 aa28.85■■■□□ 2.21
RFX1-205ENST00000589239 CPLX1O14810 134 aa28.84■■■□□ 2.21
RFX1-205ENST00000589239 DHX16O60231 1041 aaKnown RBP28.84■■■□□ 2.21
RFX1-205ENST00000589239 NSUN7Q8NE18 718 aaKnown RBP28.84■■■□□ 2.21
RFX1-205ENST00000589239 ACER1Q8TDN7 264 aa28.84■■■□□ 2.21
RFX1-205ENST00000589239 GPBP1L1Q9HC44 474 aaPredicted RBP28.84■■■□□ 2.21
RFX1-205ENST00000589239 CMTR1Q8N1G2 835 aaKnown RBP28.84■■■□□ 2.21
RFX1-205ENST00000589239 CTCFLQ8NI51 663 aaPredicted RBP28.84■■■□□ 2.21
RFX1-205ENST00000589239 SMC3Q9UQE7 1217 aa28.84■■■□□ 2.21
RFX1-205ENST00000589239 ATAD5Q96QE3 1844 aa28.84■■■□□ 2.21
RFX1-205ENST00000589239 MYH4Q9Y623 1939 aa28.83■■■□□ 2.21
RFX1-205ENST00000589239 MOB2Q70IA6 237 aa28.83■■■□□ 2.21
RFX1-205ENST00000589239 GINM1Q9NU53 330 aa28.83■■■□□ 2.21
RFX1-205ENST00000589239 ZNF408Q9H9D4 720 aa28.82■■■□□ 2.2
RFX1-205ENST00000589239 ARHGEF10LQ9HCE6 1279 aa28.82■■■□□ 2.2
RFX1-205ENST00000589239 USP17L5A8MUK1 530 aa28.82■■■□□ 2.2
RFX1-205ENST00000589239 RAD21O60216 631 aa28.82■■■□□ 2.2
RFX1-205ENST00000589239 TTLL12Q14166 644 aaPredicted RBP28.82■■■□□ 2.2
RFX1-205ENST00000589239 NTRK3Q16288 839 aa28.82■■■□□ 2.2
RFX1-205ENST00000589239 LLPHQ9BRT6 129 aaKnown RBP28.82■■■□□ 2.2
RFX1-205ENST00000589239 CCDC196A0A1B0GTZ2 297 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 PDHBP11177 359 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 GJB2P29033 226 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 MAP3K9P80192 1104 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 GRM4Q14833 912 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 USP17L2Q6R6M4 530 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.81■■■□□ 2.2
RFX1-205ENST00000589239 STAG2Q8N3U4 1231 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 CCDC82Q8N4S0 544 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 DDX11Q96FC9 970 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 PICK1Q9NRD5 415 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 PTPDC1A2A3K4 754 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 IREB2P48200 963 aaKnown RBP28.81■■■□□ 2.2
RFX1-205ENST00000589239 PPP2R5BQ15173 497 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 MAP3K14Q99558 947 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 RBM28Q9NW13 759 aaKnown RBP28.81■■■□□ 2.2
RFX1-205ENST00000589239 MAD2L2Q9UI95 211 aa28.81■■■□□ 2.2
RFX1-205ENST00000589239 PLEKHA8P1O95397 391 aa28.8■■■□□ 2.2
RFX1-205ENST00000589239 GOLGA8HP0CJ92 632 aa28.8■■■□□ 2.2
RFX1-205ENST00000589239 VGLL4Q14135 290 aa28.8■■■□□ 2.2
RFX1-205ENST00000589239 SMARCC2Q8TAQ2 1214 aa28.8■■■□□ 2.2
RFX1-205ENST00000589239 PHKBQ93100 1093 aa28.8■■■□□ 2.2
RFX1-205ENST00000589239 DOCK1Q14185 1865 aa28.8■■■□□ 2.2
RFX1-205ENST00000589239 PTPRAP18433 802 aa28.79■■■□□ 2.2
RFX1-205ENST00000589239 KIF5BP33176 963 aa28.79■■■□□ 2.2
RFX1-205ENST00000589239 CHADLQ6NUI6 762 aa28.79■■■□□ 2.2
RFX1-205ENST00000589239 TMX2Q9Y320 296 aa28.79■■■□□ 2.2
RFX1-205ENST00000589239 F5H6K3 240 aa28.79■■■□□ 2.2
RFX1-205ENST00000589239 KLRC3Q07444 240 aa28.79■■■□□ 2.2
RFX1-205ENST00000589239 NOL9Q5SY16 702 aaKnown RBP28.79■■■□□ 2.2
RFX1-205ENST00000589239 CPLX2Q6PUV4 134 aaKnown RBP28.79■■■□□ 2.2
RFX1-205ENST00000589239 PARP1P09874 1014 aaKnown RBP28.78■■■□□ 2.2
RFX1-205ENST00000589239 SNHG28P0DPA3 235 aa28.78■■■□□ 2.2
RFX1-205ENST00000589239 TMTC3Q6ZXV5 915 aa28.78■■■□□ 2.2
RFX1-205ENST00000589239 PALM3A6NDB9 673 aaPredicted RBP28.78■■■□□ 2.2
RFX1-205ENST00000589239 ZYXQ15942 572 aaKnown RBP28.78■■■□□ 2.2
RFX1-205ENST00000589239 CWC22Q9HCG8 908 aaKnown RBP28.78■■■□□ 2.2
RFX1-205ENST00000589239 SNCAIPQ9Y6H5 919 aa28.78■■■□□ 2.2
RFX1-205ENST00000589239 FRMPD2Q68DX3 1309 aaPredicted RBP28.78■■■□□ 2.2
RFX1-205ENST00000589239 CDKL5O76039 1030 aa28.77■■■□□ 2.2
RFX1-205ENST00000589239 DDIT3P35638 169 aa28.77■■■□□ 2.2
RFX1-205ENST00000589239 SLFN13Q68D06 897 aa28.77■■■□□ 2.2
RFX1-205ENST00000589239 GMCL1P1Q8NEA9 526 aa28.77■■■□□ 2.2
RFX1-205ENST00000589239 CSADQ9Y600 493 aa28.77■■■□□ 2.2
RFX1-205ENST00000589239 NDUFB10O96000 172 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 IFNAR1P17181 557 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 MAP3K11Q16584 847 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 NBPF11Q86T75 865 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 SPICE1Q8N0Z3 855 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 FAM43AQ8N2R8 423 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 SRBD1Q8N5C6 995 aaKnown RBP28.76■■■□□ 2.2
RFX1-205ENST00000589239 SYNPO2Q9UMS6 1093 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 ZHX2Q9Y6X8 837 aa28.76■■■□□ 2.2
RFX1-205ENST00000589239 ITGBL1O95965 494 aaPredicted RBP28.76■■■□□ 2.19
RFX1-205ENST00000589239 ARMC9Q7Z3E5 817 aa28.76■■■□□ 2.19
RFX1-205ENST00000589239 FEZ1Q99689 392 aa28.76■■■□□ 2.19
RFX1-205ENST00000589239 PAPPA2Q9BXP8 1791 aa28.76■■■□□ 2.19
RFX1-205ENST00000589239 OTOFQ9HC10 1997 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 FDPSP14324 419 aaKnown RBP28.75■■■□□ 2.19
RFX1-205ENST00000589239 KIAA1755Q5JYT7 1200 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 ANKRD13AQ8IZ07 590 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 CPVLQ9H3G5 476 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 SH2D4AQ9H788 454 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 SLC1A4P43007 532 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 HMGN5P82970 282 aaKnown RBP28.75■■■□□ 2.19
RFX1-205ENST00000589239 FUT2Q10981 343 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 KCTD1Q719H9 257 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 CLMNQ96JQ2 1002 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 SLC26A6Q9BXS9 759 aa28.75■■■□□ 2.19
RFX1-205ENST00000589239 KLRF2D3W0D1 207 aa28.74■■■□□ 2.19
RFX1-205ENST00000589239 UBE2Q2LH0YL09 131 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms