RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 VCAM1P19320 739 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 RTP1P59025 263 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 CCNA1P78396 465 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 GRB14Q14449 540 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 WDR78Q5VTH9 848 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
NCLN-203ENST00000587740 DNM1LO00429 736 aa18.93■□□□□ 0.62
NCLN-203ENST00000587740 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
NCLN-203ENST00000587740 CNGA1P29973 690 aa18.93■□□□□ 0.62
NCLN-203ENST00000587740 ATP2B2Q01814 1243 aa18.93■□□□□ 0.62
NCLN-203ENST00000587740 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
NCLN-203ENST00000587740 FEZ1Q99689 392 aa18.93■□□□□ 0.62
NCLN-203ENST00000587740 KIAA1683Q9H0B3 1180 aa18.93■□□□□ 0.62
NCLN-203ENST00000587740 CDH23Q9H251 3354 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 SPDYE16A6NNV3 312 aaPredicted RBP18.92■□□□□ 0.62
NCLN-203ENST00000587740 MSCO60682 206 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 CYBAP13498 195 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 CYP7A1P22680 504 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 SHHQ15465 462 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 C9orf50Q5SZB4 431 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 GJC2Q5T442 439 aaPredicted RBP18.92■□□□□ 0.62
NCLN-203ENST00000587740 B4GALNT3Q6L9W6 998 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
NCLN-203ENST00000587740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.92■□□□□ 0.62
NCLN-203ENST00000587740 CDX2Q99626 313 aaPredicted RBP18.92■□□□□ 0.62
NCLN-203ENST00000587740 GUCY1A2P33402 732 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 RAB3GAP1Q15042 981 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 ZNF697Q5TEC3 545 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 EHD4Q9H223 541 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 SERPINB13Q9UIV8 391 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 MYH7P12883 1935 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 TTC28Q96AY4 2481 aa18.91■□□□□ 0.62
NCLN-203ENST00000587740 ATP5JP18859 108 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 USP14P54578 494 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
NCLN-203ENST00000587740 SLC39A5Q6ZMH5 540 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 SEMA6BQ9H3T3 888 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 RPAP3Q9H6T3 665 aaPredicted RBP18.9■□□□□ 0.62
NCLN-203ENST00000587740 ECHDC1Q9NTX5 307 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 ATP11BQ9Y2G3 1177 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 IVNS1ABPQ9Y6Y0 642 aa18.9■□□□□ 0.62
NCLN-203ENST00000587740 IGSF3O75054 1194 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 SHMT1P34896 483 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 USP5P45974 858 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 PLCD1P51178 756 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 MOV10L1Q9BXT6 1211 aaKnown RBP18.89■□□□□ 0.61
NCLN-203ENST00000587740 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 PRKAG2Q9UGJ0 569 aa18.89■□□□□ 0.61
NCLN-203ENST00000587740 IDH1O75874 414 aaKnown RBP18.88■□□□□ 0.61
NCLN-203ENST00000587740 ADORA2AP29274 412 aa18.88■□□□□ 0.61
NCLN-203ENST00000587740 SNX17Q15036 470 aa18.88■□□□□ 0.61
NCLN-203ENST00000587740 BADQ92934 168 aa18.88■□□□□ 0.61
NCLN-203ENST00000587740 DNAJC2Q99543 621 aaKnown RBP18.88■□□□□ 0.61
NCLN-203ENST00000587740 LNPKQ9C0E8 428 aa18.88■□□□□ 0.61
NCLN-203ENST00000587740 TTYH1Q9H313 450 aaPredicted RBP18.88■□□□□ 0.61
NCLN-203ENST00000587740 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
NCLN-203ENST00000587740 A0A1W2PRG0 241 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 COBLO75128 1261 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 NUCB1Q02818 461 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 EVX2Q03828 476 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 TTF1Q15361 905 aaPredicted RBP18.87■□□□□ 0.61
NCLN-203ENST00000587740 TRIM60Q495X7 471 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 OLFML2BQ68BL8 750 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 SH3RF1Q7Z6J0 888 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 DPP9Q86TI2 863 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 CHD1LQ86WJ1 897 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 MAGEB6Q8N7X4 407 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 MAFAQ8NHW3 353 aaPredicted RBP18.87■□□□□ 0.61
NCLN-203ENST00000587740 ANTXR1Q9H6X2 564 aa18.87■□□□□ 0.61
NCLN-203ENST00000587740 ZNF236Q9UL36 1845 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 ERC2O15083 957 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 MX1P20591 662 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 GABPAQ06546 454 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 SEPT2Q15019 361 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 KIAA1755Q5JYT7 1200 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 PRAMEF19Q5SWL8 479 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 ARRDC4Q8NCT1 418 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 TRIM43Q96BQ3 446 aaPredicted RBP18.86■□□□□ 0.61
NCLN-203ENST00000587740 HAUS7Q99871 368 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 PRDM5Q9NQX1 630 aaPredicted RBP18.86■□□□□ 0.61
NCLN-203ENST00000587740 PDLIM7Q9NR12 457 aa18.86■□□□□ 0.61
NCLN-203ENST00000587740 GOLIM4O00461 696 aa18.85■□□□□ 0.61
NCLN-203ENST00000587740 SEPT4O43236 478 aa18.85■□□□□ 0.61
NCLN-203ENST00000587740 COG2Q14746 738 aa18.85■□□□□ 0.61
NCLN-203ENST00000587740 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
NCLN-203ENST00000587740 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
NCLN-203ENST00000587740 SPATC1LQ9H0A9 340 aa18.85■□□□□ 0.61
NCLN-203ENST00000587740 PAG1Q9NWQ8 432 aa18.85■□□□□ 0.61
NCLN-203ENST00000587740 KBTBD13C9JR72 458 aa18.84■□□□□ 0.61
NCLN-203ENST00000587740 STRNO43815 780 aa18.84■□□□□ 0.61
NCLN-203ENST00000587740 ERCC3P19447 782 aa18.84■□□□□ 0.61
NCLN-203ENST00000587740 ADCYAP1R1P41586 468 aa18.84■□□□□ 0.61
NCLN-203ENST00000587740 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms