RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 SHMT1P34896 483 aa15.82■□□□□ 0.12
CDK5RAP3-234ENST00000584525 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
CDK5RAP3-234ENST00000584525 RWDD1Q9H446 243 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-234ENST00000584525 MAGEB6P1A0A0J9YX57 407 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PLXNB2O15031 1838 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 GUCY1A2P33402 732 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 IRX6P78412 446 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 COG2Q14746 738 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SEPT2Q15019 361 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 TRPV1Q8NER1 839 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 FAM161BQ96MY7 647 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 DNAJC2Q99543 621 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 TANGO6Q9C0B7 1094 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 DCTPP1Q9H773 170 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 HOXC10Q9NYD6 342 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PCDHB15Q9Y5E8 787 aa15.81■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ALPK3Q96L96 1907 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 POTEB2H3BUK9 544 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ADORA2AP29274 412 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 RTP1P59025 263 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 TTF1Q15361 905 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 GJC2Q5T442 439 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ARRDC4Q8NCT1 418 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 RIOK1Q9BRS2 568 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 MOV10L1Q9BXT6 1211 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 MCM9Q9NXL9 1143 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SIPA1L1O43166 1804 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 MAST2Q6P0Q8 1798 aa15.8■□□□□ 0.12
CDK5RAP3-234ENST00000584525 STRNO43815 780 aa15.79■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SLC9C2Q5TAH2 1124 aa15.79■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ANO1Q5XXA6 986 aa15.79■□□□□ 0.12
CDK5RAP3-234ENST00000584525 FAM109BQ6ICB4 259 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-234ENST00000584525 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-234ENST00000584525 A0A1W2PRG0 241 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 CYBAP13498 195 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ERCC3P19447 782 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 GABPAQ06546 454 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PLS1Q14651 629 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 OLFML2BQ68BL8 750 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SPATC1LQ9H0A9 340 aa15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PRDM5Q9NQX1 630 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-234ENST00000584525 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PDE6AP16499 860 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 EVX2Q03828 476 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SLC39A5Q6ZMH5 540 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 NCAPG2Q86XI2 1143 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 GUCD1Q96NT3 240 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 BOLA2Q9H3K6 86 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 SLC5A4Q9NY91 659 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 CUL9Q8IWT3 2517 aa15.77■□□□□ 0.12
CDK5RAP3-234ENST00000584525 GOLIM4O00461 696 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ERC2O15083 957 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SEPT4O43236 478 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 COBLO75128 1261 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 IGHA2P01877 340 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 NEFLP07196 543 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 CYP2D6P10635 497 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 HDAC1Q13547 482 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 PRAMEF19Q5SWL8 479 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ZNF697Q5TEC3 545 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 TMEM179Q6ZVK1 233 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 MB21D1Q8N884 522 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SLC44A5Q8NCS7 719 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SHCBP1Q8NEM2 672 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SDR42E1Q8WUS8 393 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.76■□□□□ 0.114e-14■■□□□ 11.6
CDK5RAP3-234ENST00000584525 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ZNF532Q9HCE3 1301 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 FLOT1O75955 427 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SHHQ15465 462 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 TRIM60Q495X7 471 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 KIAA1755Q5JYT7 1200 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SPICE1Q8N0Z3 855 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 COL25A1Q9BXS0 654 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 MROH8Q9H579 483 aa15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ATP5JP18859 108 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 DSG3P32926 999 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ADCYAP1R1P41586 468 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ZSCAN25Q6NSZ9 544 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 LCORLQ8N3X6 602 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 BADQ92934 168 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ATG4CQ96DT6 458 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 DYNLL2Q96FJ2 89 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 ARHGEF10LQ9HCE6 1279 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 PAG1Q9NWQ8 432 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 SWAP70Q9UH65 585 aa15.74■□□□□ 0.11
CDK5RAP3-234ENST00000584525 FCER1AP12319 257 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms