RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 MXD3Q9BW11 206 aa11.79□□□□□ -0.52
IFT20-213ENST00000583796 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
IFT20-213ENST00000583796 DDX4Q9NQI0 724 aaKnown RBP11.79□□□□□ -0.52
IFT20-213ENST00000583796 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.79□□□□□ -0.52
IFT20-213ENST00000583796 PI4KBQ9UBF8 816 aa11.79□□□□□ -0.52
IFT20-213ENST00000583796 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
IFT20-213ENST00000583796 STX8Q9UNK0 236 aa11.79□□□□□ -0.52
IFT20-213ENST00000583796 IGKV6D-41A0A0C4DH26 115 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
IFT20-213ENST00000583796 YDJCA8MPS7 323 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 SPTLC2O15270 562 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 BMP15O95972 392 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 SCG2P13521 617 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 FOSBP53539 338 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 OTUD7BQ6GQQ9 843 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 CCDC73Q6ZRK6 1079 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 METTL16Q86W50 562 aaKnown RBP11.78□□□□□ -0.52
IFT20-213ENST00000583796 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
IFT20-213ENST00000583796 MTMR14Q8NCE2 650 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 CCDC148Q8NFR7 591 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 PGBD1Q96JS3 809 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 AIFM3Q96NN9 605 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 TAOK3Q9H2K8 898 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 SYNPO2Q9UMS6 1093 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
IFT20-213ENST00000583796 ZBTB7AO95365 584 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 PLEKHA8P1O95397 391 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 TTLL1O95922 423 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 XRCC6P12956 609 aaKnown RBP eCLIP11.77□□□□□ -0.52
IFT20-213ENST00000583796 GUCY1A2P33402 732 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 KRT2P35908 639 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 ME1P48163 572 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 TRAPPC10P48553 1259 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.52
IFT20-213ENST00000583796 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 SF3A1Q15459 793 aaKnown RBP11.77□□□□□ -0.52
IFT20-213ENST00000583796 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.52
IFT20-213ENST00000583796 SRBD1Q8N5C6 995 aaKnown RBP11.77□□□□□ -0.52
IFT20-213ENST00000583796 CCDC12Q8WUD4 166 aaPredicted RBP11.77□□□□□ -0.52
IFT20-213ENST00000583796 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.52
IFT20-213ENST00000583796 CEP95Q96GE4 821 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 GMLQ99445 158 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 TSPY26PQ9H489 355 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 KCNQ5Q9NR82 932 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 MAD2L2Q9UI95 211 aa11.77□□□□□ -0.52
IFT20-213ENST00000583796 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.52
IFT20-213ENST00000583796 SIPA1L1O43166 1804 aa11.77□□□□□ -0.53
IFT20-213ENST00000583796 CAVIN2O95810 425 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 PARP1P09874 1014 aaKnown RBP11.76□□□□□ -0.53
IFT20-213ENST00000583796 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 SHMT1P34896 483 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 NFIAQ12857 509 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 MAP3K11Q16584 847 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 CFAP100Q494V2 611 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 ASPRV1Q53RT3 343 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 MRPS27Q92552 414 aaKnown RBP11.76□□□□□ -0.53
IFT20-213ENST00000583796 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 GJB4Q9NTQ9 266 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
IFT20-213ENST00000583796 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
IFT20-213ENST00000583796 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 BTBD18B2RXH4 712 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
IFT20-213ENST00000583796 TATDN1Q6P1N9 297 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 DAGLBQ8NCG7 672 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 JDP2Q8WYK2 163 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 ZNF277Q9NRM2 450 aaPredicted RBP11.76□□□□□ -0.53
IFT20-213ENST00000583796 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 PCDHA7Q9UN72 937 aa11.76□□□□□ -0.53
IFT20-213ENST00000583796 COL4A5P29400 1685 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 FAM237AA0A1B0GTK4 181 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 PSMD14O00487 310 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 KINO60870 393 aaKnown RBP11.75□□□□□ -0.53
IFT20-213ENST00000583796 LIG1P18858 919 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 CMA1P23946 247 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
IFT20-213ENST00000583796 TNIP1Q15025 636 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 PTPAQ15257 358 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 UVSSAQ2YD98 709 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
IFT20-213ENST00000583796 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
IFT20-213ENST00000583796 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
IFT20-213ENST00000583796 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
IFT20-213ENST00000583796 TNMDQ9H2S6 317 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms