RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CFAP100Q494V2 611 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 PNMA1Q8ND90 353 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 SMARCE1Q969G3 411 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 EPSTI1Q96J88 318 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 TRPC5Q9UL62 973 aaPredicted RBP15.61■□□□□ 0.09
SRSF1-205ENST00000582730 TRIM37O94972 964 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 AFMP43652 599 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 SYCP1Q15431 976 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 PTPN21Q16825 1174 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.09
SRSF1-205ENST00000582730 CD209Q9NNX6 404 aa15.61■□□□□ 0.09
SRSF1-205ENST00000582730 LDHCP07864 332 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 BTDP43251 543 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 TTC38Q5R3I4 469 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 RCSD1Q6JBY9 416 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
SRSF1-205ENST00000582730 VWA3AA6NCI4 1184 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 NEMFO60524 1076 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 HSPA1LP34931 641 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 MAN1B1Q9UKM7 699 aa15.6■□□□□ 0.09
SRSF1-205ENST00000582730 CCDC88AQ3V6T2 1871 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 IKBKBO14920 756 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 ADRA2BP18089 450 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 MCM7P33993 719 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 PLCD1P51178 756 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 UBASH3AP57075 661 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 STAG2Q8N3U4 1231 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 IL17RBQ9NRM6 502 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 FANCLQ9NW38 375 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 GSDMDP57764 484 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 MFSD14BQ5SR56 506 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 TRMT44Q8IYL2 757 aaKnown RBP15.59■□□□□ 0.09
SRSF1-205ENST00000582730 SYMPKQ92797 1274 aaKnown RBP15.59■□□□□ 0.09
SRSF1-205ENST00000582730 USP27XA6NNY8 438 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 TEX11Q8IYF3 940 aa15.59■□□□□ 0.09
SRSF1-205ENST00000582730 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
SRSF1-205ENST00000582730 DDX41Q9UJV9 622 aaKnown RBP15.59■□□□□ 0.09
SRSF1-205ENST00000582730 RIMBP2O15034 1052 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 BMP6P22004 513 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 SFPQP23246 707 aaKnown RBP eCLIP15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CASP1P29466 404 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 PTGDRQ13258 359 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CCDC112Q8NEF3 446 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CDK11BP21127 795 aaKnown RBP15.58■□□□□ 0.08
SRSF1-205ENST00000582730 ATP2B4P23634 1241 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CCZ1BP86790 482 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CCZ1P86791 482 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-205ENST00000582730 RASGRP4Q8TDF6 673 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 DPF2Q92785 391 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 CCDC34Q96HJ3 373 aa15.58■□□□□ 0.08
SRSF1-205ENST00000582730 F8W031 263 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 GOLGA8HP0CJ92 632 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 PFKFB3Q16875 520 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 STAMQ92783 540 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 MKRN1Q9UHC7 482 aaKnown RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 PAXBP1Q9Y5B6 917 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 ADAMTS3O15072 1205 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 MDM2Q00987 491 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 GABPB1Q06547 395 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 NPY5RQ15761 445 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 KLHL10Q6JEL2 608 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 RTFDC1Q9BY42 306 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 LY75O60449 1722 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 A0A087X0B3 334 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 ACTN4O43707 911 aaKnown RBP15.57■□□□□ 0.08
SRSF1-205ENST00000582730 HEATR3Q7Z4Q2 680 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 DGKHQ86XP1 1220 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 HSD3B7Q9H2F3 369 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 IMPACTQ9P2X3 320 aa15.57■□□□□ 0.08
SRSF1-205ENST00000582730 DDR1Q08345 913 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 KANK3Q6NY19 840 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 RASGRP2Q7LDG7 609 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 POLLQ9UGP5 575 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 LAMB1P07942 1786 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 MAST2Q6P0Q8 1798 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 NRDCO43847 1150 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 BMP15O95972 392 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 SLFN14P0C7P3 912 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 TMED8Q6PL24 325 aaPredicted RBP15.56■□□□□ 0.08
SRSF1-205ENST00000582730 FERMT2Q96AC1 680 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 NFE2L3Q9Y4A8 694 aa15.56■□□□□ 0.08
SRSF1-205ENST00000582730 CBFA2T2O43439 604 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 CRY2Q49AN0 593 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 ARMCX5Q6P1M9 558 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 CCDC150Q8NCX0 1101 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 TBC1D16Q8TBP0 767 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 TNFRSF25Q93038 417 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 OSBPL5Q9H0X9 879 aaPredicted RBP15.55■□□□□ 0.08
SRSF1-205ENST00000582730 DACH1Q9UI36 760 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 MORC2Q9Y6X9 1032 aaPredicted RBP15.55■□□□□ 0.08
SRSF1-205ENST00000582730 GTF2IP78347 998 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 FMR1Q06787 632 aaKnown RBP eCLIP15.55■□□□□ 0.082e-28■■■■■ 131.1
SRSF1-205ENST00000582730 PICALMQ13492 652 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 TAF3Q5VWG9 929 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 BLIDQ8IZY5 108 aa15.55■□□□□ 0.08
SRSF1-205ENST00000582730 KIF18AQ8NI77 898 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms