RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 RASA1P20936 1047 aa12.7□□□□□ -0.38
SUPT4H1-204ENST00000580947 GJA8P48165 433 aa12.7□□□□□ -0.38
SUPT4H1-204ENST00000580947 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
SUPT4H1-204ENST00000580947 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
SUPT4H1-204ENST00000580947 RABGAP1Q9Y3P9 1069 aa12.7□□□□□ -0.38
SUPT4H1-204ENST00000580947 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 GNAT2P19087 354 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 ICA1Q05084 483 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 MORN1Q5T089 497 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 PRPF38BQ5VTL8 546 aaKnown RBP12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 PAGR1Q9BTK6 254 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 VCPKMTQ9H867 229 aa12.69□□□□□ -0.38
SUPT4H1-204ENST00000580947 IGKV6D-41A0A0C4DH26 115 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 MAPK4P31152 587 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 UBXN2AP68543 259 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 TRIM32Q13049 653 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 TRIB2Q92519 343 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 LPAR1Q92633 364 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 RNF208Q9H0X6 261 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 MCM3APO60318 1980 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 PLIN4Q96Q06 1357 aa12.68□□□□□ -0.38
SUPT4H1-204ENST00000580947 IGHA2P01877 340 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 HMGCRP04035 888 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 XRCC5P13010 732 aaKnown RBP12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 COG2Q14746 738 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 LRRFIP1Q32MZ4 808 aaKnown RBP12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 SOCS4Q8WXH5 440 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
SUPT4H1-204ENST00000580947 MINDY4BA8MYZ0 360 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 SLC34A2O95436 690 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 SGPL1O95470 568 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 CYP2B6P20813 491 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 DSG3P32926 999 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 TDO2P48775 406 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 NUCB1Q02818 461 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 RWDD1Q9H446 243 aaPredicted RBP12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 TACC3Q9Y6A5 838 aa12.66□□□□□ -0.38
SUPT4H1-204ENST00000580947 SZT2Q5T011 3432 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 A0A0D9SFI3 127 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 GRB14Q14449 540 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 CCL14Q16627 93 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 VPS53Q5VIR6 699 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 PLEKHM2Q8IWE5 1019 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 ATG4CQ96DT6 458 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 DEFB118Q96PH6 123 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
SUPT4H1-204ENST00000580947 PRDM1O75626 825 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 APPP05067 770 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 HOXC6P09630 235 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 PTPREP23469 700 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 CCNA1P78396 465 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 MAP2K5Q13163 448 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 B4GALNT3Q6L9W6 998 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 STK11IPQ8N1F8 1099 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 REPS2Q8NFH8 660 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 FAM227BQ96M60 508 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 APBA2Q99767 749 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 SPATC1LQ9H0A9 340 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 FBXO28Q9NVF7 368 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 FLRT1Q9NZU1 646 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 NYAP2Q9P242 653 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 LCTP09848 1927 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
SUPT4H1-204ENST00000580947 RPTORQ8N122 1335 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 FLOT1O75955 427 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 RGS2P41220 211 aa12.63□□□□□ -0.39
SUPT4H1-204ENST00000580947 PPARAQ07869 468 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms