RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 NEDD1Q8NHV4 660 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 KAT14Q9H8E8 782 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 TMOD2Q9NZR1 351 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 MYH1P12882 1939 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 VEGFAP15692 232 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 HMGN5P82970 282 aaKnown RBP14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 PRAMEF18Q5VWM3 479 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 MTA3Q9BTC8 594 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CNTNAP1P78357 1384 aa14.69□□□□□ -0.06
CDK5RAP3-217ENST00000580287 EPS15P42566 896 aa14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CAMK4Q16566 473 aa14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 LRRC47Q8N1G4 583 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ZBED3Q96IU2 234 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DHX36Q9H2U1 1008 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DGKHQ86XP1 1220 aa14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 LAMB1P07942 1786 aa14.68□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ZNF280AP59817 542 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DLK2Q6UY11 383 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SRBD1Q8N5C6 995 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 TRPM4Q8TD43 1214 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 KIF3AQ9Y496 699 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 BAZ2BQ9UIF8 2168 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ENTPD3O75355 529 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 GPR162Q16538 588 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CERKLQ49MI3 558 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 C9orf131Q5VYM1 1079 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 USP17L2Q6R6M4 530 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 ALG1Q9BT22 464 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 TRIM34Q9BYJ4 488 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SCAND2PQ9GZW5 306 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 MTMR4Q9NYA4 1195 aa14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-217ENST00000580287 MYO1BO43795 1136 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 RAD21O60216 631 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 PTMAP06454 111 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 IFNAR1P17181 557 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SSRP1Q08945 709 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 RASA3Q14644 834 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 C17orf53Q8N3J3 647 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 MTMR14Q8NCE2 650 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 C8orf76Q96K31 380 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 TCP11L1Q9NUJ3 509 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 FZD1Q9UP38 647 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CPLX2Q6PUV4 134 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 DPF2Q92785 391 aa14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 NOL7Q9UMY1 257 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-217ENST00000580287 RPS12P25398 132 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 FUT2Q10981 343 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SEPT2Q15019 361 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 KIF4BQ2VIQ3 1234 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CTCFLQ8NI51 663 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 BICD2Q8TD16 824 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 FTOQ9C0B1 505 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 EHD4Q9H223 541 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SWAP70Q9UH65 585 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 HACL1Q9UJ83 578 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 KCNJ14Q9UNX9 436 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 LETM1O95202 739 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 LIG1P18858 919 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 HIRAP54198 1017 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 TERF1P54274 439 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 RESTQ13127 1097 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 SHISA4Q96DD7 197 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 PSME4Q14997 1843 aa14.65□□□□□ -0.06
CDK5RAP3-217ENST00000580287 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FMNL1O95466 1100 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GH2P01242 217 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ANKS1AQ92625 1134 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 MAD2L2Q9UI95 211 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 R3HCC1Q9Y3T6 440 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FRMPD2Q68DX3 1309 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CCDC196A0A1B0GTZ2 297 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 CDKL5O76039 1030 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 DDAH1O94760 285 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 RBM10P98175 930 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 HS1BP3Q53T59 392 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TATDN1Q6P1N9 297 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 TMTC3Q6ZXV5 915 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ZSCAN16Q9H4T2 348 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 GPRC5DQ9NZD1 345 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 FOCADQ5VW36 1801 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ATRNL1Q5VV63 1379 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 ARFGEF1Q9Y6D6 1849 aa14.64□□□□□ -0.07
CDK5RAP3-217ENST00000580287 IGKV6D-41A0A0C4DH26 115 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 KIF28PB7ZC32 967 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 H7C1D1 291 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 AP5Z1O43299 807 aa14.63□□□□□ -0.07
CDK5RAP3-217ENST00000580287 PKN1Q16512 942 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms