RNA–Protein interactions for RNA: ENST00000579589.1

RAB11FIP4-204, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-204ENST00000579589 ARHGEF10LQ9HCE6 1279 aa23.67■■□□□ 1.38
RAB11FIP4-204ENST00000579589 NEFLP07196 543 aa23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 FCGRTP55899 365 aa23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 PDE4BQ07343 736 aa23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 SLC9C1Q4G0N8 1177 aa23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 CWC27Q6UX04 472 aaKnown RBP23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 ZNF444Q8N0Y2 327 aaPredicted RBP23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 TACC3Q9Y6A5 838 aa23.66■■□□□ 1.38
RAB11FIP4-204ENST00000579589 HSPD1P10809 573 aaKnown RBP23.65■■□□□ 1.38
RAB11FIP4-204ENST00000579589 FLT3LGP49771 235 aa23.65■■□□□ 1.38
RAB11FIP4-204ENST00000579589 GJD2Q9UKL4 321 aa23.65■■□□□ 1.38
RAB11FIP4-204ENST00000579589 TMX2Q9Y320 296 aa23.65■■□□□ 1.38
RAB11FIP4-204ENST00000579589 USP17L15C9J2P7 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L13C9JLJ4 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L11C9JVI0 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L18D6R9N7 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L22D6RA61 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L17D6RBQ6 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L19D6RCP7 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L20D6RJB6 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 PRMT2P55345 433 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 USP17L24Q0WX57 530 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 SHISA4Q96DD7 197 aa23.64■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ZMYM6O95789 1325 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ZNFX1Q9P2E3 1918 aaKnown RBP23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 PRDM1O75626 825 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 FGAP02671 866 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ELNP15502 786 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 CATSPERGQ6ZRH7 1159 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 GTF3C2Q8WUA4 911 aaPredicted RBP23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 LPAR1Q92633 364 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 PORCNQ9H237 461 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ANAPC4Q9UJX5 808 aa23.63■■□□□ 1.37
RAB11FIP4-204ENST00000579589 EEF2P13639 858 aaKnown RBP23.62■■□□□ 1.37
RAB11FIP4-204ENST00000579589 HOXD10P28358 340 aa23.62■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ALPK3Q96L96 1907 aa23.62■■□□□ 1.37
RAB11FIP4-204ENST00000579589 FRMPD3Q5JV73 1810 aa23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 TNPO2O14787 897 aaKnown RBP23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 GRK4P32298 578 aa23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ATP2B2Q01814 1243 aa23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 RPAP3Q9H6T3 665 aaPredicted RBP23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 VCPKMTQ9H867 229 aa23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 BTBD7Q9P203 1132 aa23.61■■□□□ 1.37
RAB11FIP4-204ENST00000579589 SPDYE16A6NNV3 312 aaPredicted RBP23.6■■□□□ 1.37
RAB11FIP4-204ENST00000579589 CTDSPL2Q05D32 466 aa23.6■■□□□ 1.37
RAB11FIP4-204ENST00000579589 RAET1EQ8TD07 263 aa23.6■■□□□ 1.37
RAB11FIP4-204ENST00000579589 CCDC136Q96JN2 1154 aa23.6■■□□□ 1.37
RAB11FIP4-204ENST00000579589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.6■■□□□ 1.37
RAB11FIP4-204ENST00000579589 TSPY3P0CV98 308 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 TSPY8P0CW00 308 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ERVK-9P63128 1117 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 ERVK-24P63145 666 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 TRIM32Q13049 653 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 IRF5Q13568 498 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 NEDD1Q8NHV4 660 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 NYAP2Q9P242 653 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 PLIN4Q96Q06 1357 aa23.59■■□□□ 1.37
RAB11FIP4-204ENST00000579589 IGKV6D-41A0A0C4DH26 115 aa23.58■■□□□ 1.37
RAB11FIP4-204ENST00000579589 GPRC5AQ8NFJ5 357 aa23.58■■□□□ 1.37
RAB11FIP4-204ENST00000579589 PAGR1Q9BTK6 254 aa23.58■■□□□ 1.37
RAB11FIP4-204ENST00000579589 GOPCQ9HD26 462 aa23.58■■□□□ 1.37
RAB11FIP4-204ENST00000579589 LAMA4Q16363 1823 aa23.58■■□□□ 1.37
RAB11FIP4-204ENST00000579589 RAD50Q92878 1312 aa23.58■■□□□ 1.36
RAB11FIP4-204ENST00000579589 ZNF236Q9UL36 1845 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 ORC4O43929 436 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 ADCY3O60266 1144 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 FGRP09769 529 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 TFAP4Q01664 338 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 LBX2Q6XYB7 198 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 SPICE1Q8N0Z3 855 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 NKX2-3Q8TAU0 364 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 RUFY2Q8WXA3 655 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 USP6NLQ92738 828 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 DSCC1Q9BVC3 393 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 TANGO6Q9C0B7 1094 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 UNC93B1Q9H1C4 597 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 INCENPQ9NQS7 918 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 MTMR4Q9NYA4 1195 aa23.57■■□□□ 1.36
RAB11FIP4-204ENST00000579589 WDR46O15213 610 aaKnown RBP23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 CHMLP26374 656 aa23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 FAM47AQ5JRC9 791 aa23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 PPP4R3BQ5MIZ7 849 aa23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 CEP95Q96GE4 821 aa23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 HOXC10Q9NYD6 342 aa23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 SYNPO2Q9UMS6 1093 aa23.56■■□□□ 1.36
RAB11FIP4-204ENST00000579589 SMCHD1A6NHR9 2005 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 TSPY2A6NKD2 308 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 TTLL1O95922 423 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 INHAP05111 366 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 PCP11498 1178 aaKnown RBP23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 CCL5P13501 91 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 COG2Q14746 738 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 NBPF11Q86T75 865 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 TRIB2Q92519 343 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 MKL1Q969V6 931 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 COA7Q96BR5 231 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 CLIP2Q9UDT6 1046 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 RABGAP1Q9Y3P9 1069 aa23.55■■□□□ 1.36
RAB11FIP4-204ENST00000579589 RANBP6O60518 1105 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms