RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 GOPCQ9HD26 462 aa11.88□□□□□ -0.51
MKS1-208ENST00000579358 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
MKS1-208ENST00000579358 RANBP6O60518 1105 aaKnown RBP11.87□□□□□ -0.51
MKS1-208ENST00000579358 NOVP48745 357 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 FAM110CQ1W6H9 321 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 CTU1Q7Z7A3 348 aaKnown RBP11.87□□□□□ -0.51
MKS1-208ENST00000579358 ESR2Q92731 530 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 MKL1Q969V6 931 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 RPAP3Q9H6T3 665 aaPredicted RBP11.87□□□□□ -0.51
MKS1-208ENST00000579358 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 TCP11L1Q9NUJ3 509 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 PTPRFP10586 1907 aa11.87□□□□□ -0.51
MKS1-208ENST00000579358 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
MKS1-208ENST00000579358 NEDD4P46934 1319 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 HERVK_113P62684 666 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 LACTBP83111 547 aaPredicted RBP11.86□□□□□ -0.51
MKS1-208ENST00000579358 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 ARHGEF6Q15052 776 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
MKS1-208ENST00000579358 LBX2Q6XYB7 198 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 GMCL1P1Q8NEA9 526 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 LSG1Q9H089 658 aaKnown RBP11.86□□□□□ -0.51
MKS1-208ENST00000579358 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 INCENPQ9NQS7 918 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 CLIP2Q9UDT6 1046 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
MKS1-208ENST00000579358 GNRH1P01148 92 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 CYP21A2P08686 494 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 KIF22Q14807 665 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 PKN2Q16513 984 aaKnown RBP11.85□□□□□ -0.51
MKS1-208ENST00000579358 KIAA1755Q5JYT7 1200 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 CD99L2Q8TCZ2 262 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 P2RX7Q99572 595 aaKnown RBP11.85□□□□□ -0.51
MKS1-208ENST00000579358 KRT23Q9C075 422 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 IL17RBQ9NRM6 502 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 MORF4L1Q9UBU8 362 aa11.85□□□□□ -0.51
MKS1-208ENST00000579358 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
MKS1-208ENST00000579358 F5H6K3 240 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 NDUFB10O96000 172 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 KLRC3Q07444 240 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 COG2Q14746 738 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 CCDC178Q5BJE1 867 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 IQCA1Q86XH1 822 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 SPICE1Q8N0Z3 855 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 LRRC47Q8N1G4 583 aaKnown RBP11.84□□□□□ -0.51
MKS1-208ENST00000579358 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 TTC14Q96N46 770 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 TANGO6Q9C0B7 1094 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 STX8Q9UNK0 236 aa11.84□□□□□ -0.51
MKS1-208ENST00000579358 LAMA4Q16363 1823 aa11.83□□□□□ -0.51
MKS1-208ENST00000579358 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
MKS1-208ENST00000579358 B4E1Z4 1266 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 NMT2O60551 498 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 KDM4AO75164 1064 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 TRDNQ13061 729 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 DGKHQ86XP1 1220 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 MB21D1Q8N884 522 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 GMCL1Q96IK5 515 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 HOXC10Q9NYD6 342 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 RABGAP1Q9Y3P9 1069 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 TRIM17Q9Y577 477 aa11.83□□□□□ -0.52
MKS1-208ENST00000579358 MYH8P13535 1937 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 FLOT1O75955 427 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 TOP1P11387 765 aaKnown RBP11.82□□□□□ -0.52
MKS1-208ENST00000579358 DSG3P32926 999 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 PSMC4P43686 418 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 PRMT2P55345 433 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 FCGRTP55899 365 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 ERVK-9P63128 1117 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 ERVK-24P63145 666 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 CAP1Q01518 475 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 NECTIN1Q15223 517 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 FAM83BQ5T0W9 1011 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 SLFN13Q68D06 897 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 FBXO46Q6PJ61 603 aaPredicted RBP11.82□□□□□ -0.52
MKS1-208ENST00000579358 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
MKS1-208ENST00000579358 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 NCOA7Q8NI08 942 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 MCOLN1Q9GZU1 580 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 TXNRD2Q9NNW7 524 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
MKS1-208ENST00000579358 E7EWF7 191 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 SLC27A2O14975 620 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 EPB41L2O43491 1005 aaKnown RBP11.81□□□□□ -0.52
MKS1-208ENST00000579358 RAD21O60216 631 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 CNMDO75829 334 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 REC8O95072 547 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 HOXD10P28358 340 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 CTGFP29279 349 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 SLC1A4P43007 532 aa11.81□□□□□ -0.52
MKS1-208ENST00000579358 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms