RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 B4GALNT3Q6L9W6 998 aa27.45■■□□□ 1.98
VAPA-205ENST00000578314 CHD1LQ86WJ1 897 aa27.45■■□□□ 1.98
VAPA-205ENST00000578314 CLEC10AQ8IUN9 316 aa27.45■■□□□ 1.98
VAPA-205ENST00000578314 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.45■■□□□ 1.98
VAPA-205ENST00000578314 MKNK2Q9HBH9 465 aa27.45■■□□□ 1.98
VAPA-205ENST00000578314 SPDYE16A6NNV3 312 aaPredicted RBP27.44■■□□□ 1.98
VAPA-205ENST00000578314 RASA1P20936 1047 aa27.44■■□□□ 1.98
VAPA-205ENST00000578314 COG2Q14746 738 aa27.44■■□□□ 1.98
VAPA-205ENST00000578314 PORCNQ9H237 461 aa27.44■■□□□ 1.98
VAPA-205ENST00000578314 VCPKMTQ9H867 229 aa27.44■■□□□ 1.98
VAPA-205ENST00000578314 HOXC10Q9NYD6 342 aa27.44■■□□□ 1.98
VAPA-205ENST00000578314 INHAP05111 366 aa27.43■■□□□ 1.98
VAPA-205ENST00000578314 GJB1P08034 283 aa27.43■■□□□ 1.98
VAPA-205ENST00000578314 EEF2P13639 858 aaKnown RBP27.43■■□□□ 1.98
VAPA-205ENST00000578314 RNF208Q9H0X6 261 aa27.43■■□□□ 1.98
VAPA-205ENST00000578314 CCNA1P78396 465 aa27.42■■□□□ 1.98
VAPA-205ENST00000578314 NKX2-3Q8TAU0 364 aa27.42■■□□□ 1.98
VAPA-205ENST00000578314 ZNF287Q9HBT7 754 aa27.42■■□□□ 1.98
VAPA-205ENST00000578314 BTBD7Q9P203 1132 aa27.42■■□□□ 1.98
VAPA-205ENST00000578314 GJA8P48165 433 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 GPR142Q7Z601 462 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 PLEKHH3Q7Z736 793 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 CCAR1Q8IX12 1150 aaKnown RBP27.41■■□□□ 1.98
VAPA-205ENST00000578314 STK11IPQ8N1F8 1099 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 SOCS4Q8WXH5 440 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 NUDT12Q9BQG2 462 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 TANGO6Q9C0B7 1094 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 UNC93B1Q9H1C4 597 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 OSBPL3Q9H4L5 887 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 HELLSQ9NRZ9 838 aa27.41■■□□□ 1.98
VAPA-205ENST00000578314 XRCC5P13010 732 aaKnown RBP27.4■■□□□ 1.98
VAPA-205ENST00000578314 PLEKHM2Q8IWE5 1019 aa27.4■■□□□ 1.98
VAPA-205ENST00000578314 SPICE1Q8N0Z3 855 aa27.4■■□□□ 1.98
VAPA-205ENST00000578314 USP6NLQ92738 828 aa27.4■■□□□ 1.98
VAPA-205ENST00000578314 NAPBQ9H115 298 aa27.4■■□□□ 1.98
VAPA-205ENST00000578314 WDR46O15213 610 aaKnown RBP27.39■■□□□ 1.98
VAPA-205ENST00000578314 FOXP2O15409 715 aa27.39■■□□□ 1.98
VAPA-205ENST00000578314 MORN1Q5T089 497 aa27.39■■□□□ 1.98
VAPA-205ENST00000578314 CCDC129Q6ZRS4 1044 aa27.39■■□□□ 1.98
VAPA-205ENST00000578314 SHISA4Q96DD7 197 aa27.39■■□□□ 1.98
VAPA-205ENST00000578314 NYAP2Q9P242 653 aa27.39■■□□□ 1.98
VAPA-205ENST00000578314 DOCK3Q8IZD9 2030 aa27.39■■□□□ 1.98
VAPA-205ENST00000578314 HMGCRP04035 888 aa27.38■■□□□ 1.97
VAPA-205ENST00000578314 DSG3P32926 999 aa27.38■■□□□ 1.97
VAPA-205ENST00000578314 ATP2B2Q01814 1243 aa27.38■■□□□ 1.97
VAPA-205ENST00000578314 ZNF444Q8N0Y2 327 aaPredicted RBP27.38■■□□□ 1.97
VAPA-205ENST00000578314 IGKV6D-41A0A0C4DH26 115 aa27.37■■□□□ 1.97
VAPA-205ENST00000578314 PRDM1O75626 825 aa27.37■■□□□ 1.97
VAPA-205ENST00000578314 CYP2B6P20813 491 aa27.37■■□□□ 1.97
VAPA-205ENST00000578314 PPARAQ07869 468 aa27.37■■□□□ 1.97
VAPA-205ENST00000578314 MB21D1Q8N884 522 aa27.37■■□□□ 1.97
VAPA-205ENST00000578314 GOPCQ9HD26 462 aa27.37■■□□□ 1.97
VAPA-205ENST00000578314 FLOT1O75955 427 aa27.36■■□□□ 1.97
VAPA-205ENST00000578314 SGPL1O95470 568 aa27.36■■□□□ 1.97
VAPA-205ENST00000578314 SLC3A2P08195 630 aaKnown RBP27.36■■□□□ 1.97
VAPA-205ENST00000578314 CAPN2P17655 700 aa27.36■■□□□ 1.97
VAPA-205ENST00000578314 PDE4BQ07343 736 aa27.36■■□□□ 1.97
VAPA-205ENST00000578314 MCMDC2Q4G0Z9 681 aa27.36■■□□□ 1.97
VAPA-205ENST00000578314 TRMT44Q8IYL2 757 aaKnown RBP27.36■■□□□ 1.97
VAPA-205ENST00000578314 U2AF1L4Q8WU68 220 aaKnown RBP27.36■■□□□ 1.97
VAPA-205ENST00000578314 PAK6Q9NQU5 681 aaPredicted RBP27.36■■□□□ 1.97
VAPA-205ENST00000578314 TRIM6-TRIM34B2RNG4 842 aa27.35■■□□□ 1.97
VAPA-205ENST00000578314 RGS2P41220 211 aa27.35■■□□□ 1.97
VAPA-205ENST00000578314 VPS53Q5VIR6 699 aa27.35■■□□□ 1.97
VAPA-205ENST00000578314 TRIB2Q92519 343 aa27.35■■□□□ 1.97
VAPA-205ENST00000578314 FAM227BQ96M60 508 aa27.35■■□□□ 1.97
VAPA-205ENST00000578314 PTPREP23469 700 aa27.34■■□□□ 1.97
VAPA-205ENST00000578314 ALX1Q15699 326 aa27.34■■□□□ 1.97
VAPA-205ENST00000578314 MKL1Q969V6 931 aa27.34■■□□□ 1.97
VAPA-205ENST00000578314 CWC22Q9HCG8 908 aaKnown RBP27.34■■□□□ 1.97
VAPA-205ENST00000578314 ADAMTS5Q9UNA0 930 aa27.34■■□□□ 1.97
VAPA-205ENST00000578314 MYH8P13535 1937 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 A0A0D9SFI3 127 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 SLC15A5A6NIM6 579 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 MAP2K5Q13163 448 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 SHCBP1Q8NEM2 672 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 NEDD1Q8NHV4 660 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 RILPL2Q969X0 211 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 MOV10L1Q9BXT6 1211 aaKnown RBP27.33■■□□□ 1.97
VAPA-205ENST00000578314 SPATC1LQ9H0A9 340 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 MTMR4Q9NYA4 1195 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 CLIP2Q9UDT6 1046 aa27.33■■□□□ 1.97
VAPA-205ENST00000578314 TRIM32Q13049 653 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 MAP3K21Q5TCX8 1036 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 UBE2Q1Q7Z7E8 422 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 ATG4CQ96DT6 458 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 CEP95Q96GE4 821 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 APBA2Q99767 749 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.32■■□□□ 1.964e-11■■■■■ 28.2
VAPA-205ENST00000578314 ANAPC4Q9UJX5 808 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 SYNPO2Q9UMS6 1093 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 RPTORQ8N122 1335 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 PLXNB2O15031 1838 aa27.32■■□□□ 1.96
VAPA-205ENST00000578314 F5H6K3 240 aa27.31■■□□□ 1.96
VAPA-205ENST00000578314 KLRC3Q07444 240 aa27.31■■□□□ 1.96
VAPA-205ENST00000578314 NMIQ13287 307 aaPredicted RBP27.31■■□□□ 1.96
VAPA-205ENST00000578314 GRB14Q14449 540 aa27.31■■□□□ 1.96
VAPA-205ENST00000578314 WDR78Q5VTH9 848 aa27.31■■□□□ 1.96
VAPA-205ENST00000578314 DEFB118Q96PH6 123 aa27.31■■□□□ 1.96
VAPA-205ENST00000578314 CRISPLD2Q9H0B8 497 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms