RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ANTXR2P58335 489 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 TOB2Q14106 344 aaPredicted RBP11.87□□□□□ -0.51
CRLF3-202ENST00000577725 GIMAP6Q6P9H5 292 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 Q6ZUG5 572 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 CYB5R4Q7L1T6 521 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
CRLF3-202ENST00000577725 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
CRLF3-202ENST00000577725 PRC1O43663 620 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 DTNBO60941 627 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 PRDM1O75626 825 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 PLCG2P16885 1265 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 EXOSC10Q01780 885 aaKnown RBP11.86□□□□□ -0.51
CRLF3-202ENST00000577725 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
CRLF3-202ENST00000577725 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 STAG1Q8WVM7 1258 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 DYNLL2Q96FJ2 89 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 ZDHHC15Q96MV8 337 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
CRLF3-202ENST00000577725 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 ZCCHC17Q9NP64 241 aaKnown RBP11.86□□□□□ -0.51
CRLF3-202ENST00000577725 MYPNQ86TC9 1320 aa11.86□□□□□ -0.51
CRLF3-202ENST00000577725 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 KDM4AO75164 1064 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 USP2O75604 605 aaPredicted RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 FMNL1O95466 1100 aaPredicted RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 HDLBPQ00341 1268 aaKnown RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 NFIAQ12857 509 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 MFSD6Q6ZSS7 791 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 SLC44A5Q8NCS7 719 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 TDRD3Q9H7E2 651 aaKnown RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
CRLF3-202ENST00000577725 ANAPC4Q9UJX5 808 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 SERPINA10Q9UK55 444 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
CRLF3-202ENST00000577725 CLRN2A0PK11 232 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 CTGFP29279 349 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 MCM2P49736 904 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 PLCD1P51178 756 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 FGD1P98174 961 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 APOBRQ0VD83 1088 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 TCP10Q12799 353 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 TRDNQ13061 729 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
CRLF3-202ENST00000577725 C12orf60Q5U649 245 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 RAB11FIP4Q86YS3 637 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 NECAB1Q8N987 351 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 BRF1Q92994 677 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 ZBED3Q96IU2 234 aaPredicted RBP11.84□□□□□ -0.51
CRLF3-202ENST00000577725 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
CRLF3-202ENST00000577725 DEFB118Q96PH6 123 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
CRLF3-202ENST00000577725 LIMCH1Q9UPQ0 1083 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
CRLF3-202ENST00000577725 HCN4Q9Y3Q4 1203 aa11.84□□□□□ -0.51
CRLF3-202ENST00000577725 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.51
CRLF3-202ENST00000577725 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
CRLF3-202ENST00000577725 HMGB1P09429 215 aaKnown RBP11.83□□□□□ -0.52
CRLF3-202ENST00000577725 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 FOSL2P15408 326 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 MCM5P33992 734 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 ST3GAL1Q11201 340 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 STK3Q13188 491 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 ME3Q16798 604 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 CCDC83Q8IWF9 413 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 DIS3LQ8TF46 1054 aaKnown RBP11.83□□□□□ -0.52
CRLF3-202ENST00000577725 MRIQ9BWK5 157 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
CRLF3-202ENST00000577725 RNF41Q9H4P4 317 aaPredicted RBP11.83□□□□□ -0.52
CRLF3-202ENST00000577725 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 ADGRA2Q96PE1 1338 aa11.83□□□□□ -0.52
CRLF3-202ENST00000577725 LAMA2P24043 3122 aaKnown RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 SIPA1L1O43166 1804 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 TCP10L2B9ZVM9 353 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 RANBP6O60518 1105 aaKnown RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 PRKCZQ05513 592 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 FAM47AQ5JRC9 791 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 NBPF12Q5TAG4 269 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 C17orf99Q6UX52 265 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 AMOTL1Q8IY63 956 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 MYLIPQ8WY64 445 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 KRT23Q9C075 422 aa11.82□□□□□ -0.52
CRLF3-202ENST00000577725 OSBPL5Q9H0X9 879 aaPredicted RBP11.82□□□□□ -0.52
CRLF3-202ENST00000577725 SEMA6BQ9H3T3 888 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 364.7 ms