RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 MTMR4Q9NYA4 1195 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 MGAMO43451 1857 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 PLIN4Q96Q06 1357 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 NT5C2P49902 561 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 CEP95Q96GE4 821 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 KRT23Q9C075 422 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 CNNM2Q9H8M5 875 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 CPA4Q9UI42 421 aa17.97■□□□□ 0.47
LITAF-217ENST00000575426 IGKV6D-41A0A0C4DH26 115 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 VCAM1P19320 739 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 GCLCP48506 637 aaPredicted RBP17.96■□□□□ 0.47
LITAF-217ENST00000575426 TRDNQ13061 729 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 C17orf99Q6UX52 265 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 RPAP3Q9H6T3 665 aaPredicted RBP17.96■□□□□ 0.47
LITAF-217ENST00000575426 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 RBM8AQ9Y5S9 174 aaKnown RBP17.96■□□□□ 0.47
LITAF-217ENST00000575426 TACC3Q9Y6A5 838 aa17.96■□□□□ 0.47
LITAF-217ENST00000575426 CATSPERGQ6ZRH7 1159 aa17.95■□□□□ 0.46
LITAF-217ENST00000575426 SPICE1Q8N0Z3 855 aa17.95■□□□□ 0.46
LITAF-217ENST00000575426 GTF3C2Q8WUA4 911 aaPredicted RBP17.95■□□□□ 0.46
LITAF-217ENST00000575426 MKL1Q969V6 931 aa17.95■□□□□ 0.46
LITAF-217ENST00000575426 P2RX7Q99572 595 aaKnown RBP17.95■□□□□ 0.46
LITAF-217ENST00000575426 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
LITAF-217ENST00000575426 NBPF3Q9H094 633 aa17.95■□□□□ 0.46
LITAF-217ENST00000575426 WDR46O15213 610 aaKnown RBP17.94■□□□□ 0.46
LITAF-217ENST00000575426 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
LITAF-217ENST00000575426 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 ANKRD13CQ8N6S4 541 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 CD99L2Q8TCZ2 262 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 LSG1Q9H089 658 aaKnown RBP17.94■□□□□ 0.46
LITAF-217ENST00000575426 TCP11L1Q9NUJ3 509 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 SYNPO2Q9UMS6 1093 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 NEDD4P46934 1319 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 ADGRA2Q96PE1 1338 aa17.94■□□□□ 0.46
LITAF-217ENST00000575426 B4E1Z4 1266 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 F5H6K3 240 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 KDM4AO75164 1064 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 CYP21A2P08686 494 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 HERVK_113P62684 666 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 KLRC3Q07444 240 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 COG2Q14746 738 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
LITAF-217ENST00000575426 IL17RBQ9NRM6 502 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 HOXC10Q9NYD6 342 aa17.93■□□□□ 0.46
LITAF-217ENST00000575426 NMT2O60551 498 aa17.92■□□□□ 0.46
LITAF-217ENST00000575426 BCRP11274 1271 aa17.92■□□□□ 0.46
LITAF-217ENST00000575426 RNF20Q5VTR2 975 aa17.92■□□□□ 0.46
LITAF-217ENST00000575426 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
LITAF-217ENST00000575426 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
LITAF-217ENST00000575426 TTC14Q96N46 770 aa17.92■□□□□ 0.46
LITAF-217ENST00000575426 PARP14Q460N5 1801 aa17.92■□□□□ 0.46
LITAF-217ENST00000575426 FLOT1O75955 427 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 LACTBP83111 547 aaPredicted RBP17.91■□□□□ 0.46
LITAF-217ENST00000575426 FAM110CQ1W6H9 321 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 KIAA1755Q5JYT7 1200 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
LITAF-217ENST00000575426 GMCL1P1Q8NEA9 526 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 NCOA7Q8NI08 942 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 EFCC1Q9HA90 598 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 ISY1Q9ULR0 285 aaKnown RBP17.91■□□□□ 0.46
LITAF-217ENST00000575426 TRIM17Q9Y577 477 aa17.91■□□□□ 0.46
LITAF-217ENST00000575426 E7EWF7 191 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
LITAF-217ENST00000575426 REC8O95072 547 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 FMNL1O95466 1100 aaPredicted RBP17.9■□□□□ 0.46
LITAF-217ENST00000575426 NDUFB10O96000 172 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
LITAF-217ENST00000575426 PSMC4P43686 418 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 PKN2Q16513 984 aaKnown RBP17.9■□□□□ 0.46
LITAF-217ENST00000575426 FAM83BQ5T0W9 1011 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 SLFN13Q68D06 897 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 CCAR1Q8IX12 1150 aaKnown RBP17.9■□□□□ 0.46
LITAF-217ENST00000575426 GPRC5AQ8NFJ5 357 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 ZKSCAN3Q9BRR0 538 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 PAGR1Q9BTK6 254 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 ZSWIM5Q9P217 1185 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 COL11A1P12107 1806 aaPredicted RBP17.9■□□□□ 0.46
LITAF-217ENST00000575426 RLFQ13129 1914 aa17.9■□□□□ 0.46
LITAF-217ENST00000575426 GNRH1P01148 92 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 HOXD10P28358 340 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 FCGRTP55899 365 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 CREB3L3Q68CJ9 461 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 DGKHQ86XP1 1220 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 TNS4Q8IZW8 715 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 DOCK3Q8IZD9 2030 aa17.89■□□□□ 0.45
LITAF-217ENST00000575426 ZSWIM8A7E2V4 1837 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 SLC27A2O14975 620 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 BMP3P12645 472 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 DSG3P32926 999 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 SLC1A4P43007 532 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 NOVP48745 357 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 CCNA1P78396 465 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 NECTIN1Q15223 517 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
LITAF-217ENST00000575426 OTOP1Q7RTM1 612 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms