RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 SH2D4AQ9H788 454 aa23.25■■□□□ 1.31
ABR-231ENST00000574875 HOXC10Q9NYD6 342 aa23.25■■□□□ 1.31
ABR-231ENST00000574875 MAPK4P31152 587 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 ATP2B2Q01814 1243 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 COG2Q14746 738 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 LBX2Q6XYB7 198 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 LPAR1Q92633 364 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 RNF208Q9H0X6 261 aa23.24■■□□□ 1.31
ABR-231ENST00000574875 TNRC18O15417 2968 aaPredicted RBP23.24■■□□□ 1.31
ABR-231ENST00000574875 EEF2P13639 858 aaKnown RBP23.23■■□□□ 1.31
ABR-231ENST00000574875 RASA1P20936 1047 aa23.23■■□□□ 1.31
ABR-231ENST00000574875 NUCB1Q02818 461 aa23.23■■□□□ 1.31
ABR-231ENST00000574875 KIAA1755Q5JYT7 1200 aa23.23■■□□□ 1.31
ABR-231ENST00000574875 PORCNQ9H237 461 aa23.23■■□□□ 1.31
ABR-231ENST00000574875 VCPKMTQ9H867 229 aa23.23■■□□□ 1.31
ABR-231ENST00000574875 CNMDO75829 334 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 INHAP05111 366 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 GJB1P08034 283 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 CCNA1P78396 465 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 ZNF444Q8N0Y2 327 aaPredicted RBP23.22■■□□□ 1.31
ABR-231ENST00000574875 NUDT12Q9BQG2 462 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.22■■□□□ 1.31
ABR-231ENST00000574875 TANGO6Q9C0B7 1094 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 ZNF287Q9HBT7 754 aa23.22■■□□□ 1.31
ABR-231ENST00000574875 SPDYE16A6NNV3 312 aaPredicted RBP23.21■■□□□ 1.31
ABR-231ENST00000574875 TICAM2Q86XR7 235 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 SPICE1Q8N0Z3 855 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 NKX2-3Q8TAU0 364 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 NAPBQ9H115 298 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 UNC93B1Q9H1C4 597 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 HELLSQ9NRZ9 838 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 BTBD7Q9P203 1132 aa23.21■■□□□ 1.31
ABR-231ENST00000574875 PDE4DIPQ5VU43 2346 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 ROBO3Q96MS0 1386 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 TRIM6-TRIM34B2RNG4 842 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 CYP2B6P20813 491 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 CCDC129Q6ZRS4 1044 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 GPR142Q7Z601 462 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 PLEKHH3Q7Z736 793 aa23.2■■□□□ 1.3
ABR-231ENST00000574875 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
ABR-231ENST00000574875 SLC3A2P08195 630 aaKnown RBP23.19■■□□□ 1.3
ABR-231ENST00000574875 GJA8P48165 433 aa23.19■■□□□ 1.3
ABR-231ENST00000574875 PLEKHM2Q8IWE5 1019 aa23.19■■□□□ 1.3
ABR-231ENST00000574875 SOCS4Q8WXH5 440 aa23.19■■□□□ 1.3
ABR-231ENST00000574875 WDR46O15213 610 aaKnown RBP23.18■■□□□ 1.3
ABR-231ENST00000574875 PRDM1O75626 825 aa23.18■■□□□ 1.3
ABR-231ENST00000574875 DSG3P32926 999 aa23.18■■□□□ 1.3
ABR-231ENST00000574875 PDE4BQ07343 736 aa23.18■■□□□ 1.3
ABR-231ENST00000574875 RILPL2Q969X0 211 aa23.18■■□□□ 1.3
ABR-231ENST00000574875 OSBPL3Q9H4L5 887 aa23.18■■□□□ 1.3
ABR-231ENST00000574875 GOPCQ9HD26 462 aa23.18■■□□□ 1.3
ABR-231ENST00000574875 PLXNB2O15031 1838 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 FLOT1O75955 427 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 HMGCRP04035 888 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 XRCC5P13010 732 aaKnown RBP23.17■■□□□ 1.3
ABR-231ENST00000574875 PPARAQ07869 468 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 MORN1Q5T089 497 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 WDR78Q5VTH9 848 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 USP6NLQ92738 828 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 NYAP2Q9P242 653 aa23.17■■□□□ 1.3
ABR-231ENST00000574875 RAD21O60216 631 aa23.16■■□□□ 1.3
ABR-231ENST00000574875 SGPL1O95470 568 aa23.16■■□□□ 1.3
ABR-231ENST00000574875 MCMDC2Q4G0Z9 681 aa23.16■■□□□ 1.3
ABR-231ENST00000574875 CENPQQ7L2Z9 268 aaPredicted RBP23.16■■□□□ 1.3
ABR-231ENST00000574875 U2AF1L4Q8WU68 220 aaKnown RBP23.16■■□□□ 1.3
ABR-231ENST00000574875 SHISA4Q96DD7 197 aa23.16■■□□□ 1.3
ABR-231ENST00000574875 FAM227BQ96M60 508 aa23.16■■□□□ 1.3
ABR-231ENST00000574875 FOXP2O15409 715 aa23.15■■□□□ 1.3
ABR-231ENST00000574875 PTPREP23469 700 aa23.15■■□□□ 1.3
ABR-231ENST00000574875 RGS2P41220 211 aa23.15■■□□□ 1.3
ABR-231ENST00000574875 VPS53Q5VIR6 699 aa23.15■■□□□ 1.3
ABR-231ENST00000574875 TRMT44Q8IYL2 757 aaKnown RBP23.15■■□□□ 1.3
ABR-231ENST00000574875 MB21D1Q8N884 522 aa23.15■■□□□ 1.3
ABR-231ENST00000574875 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
ABR-231ENST00000574875 BRCA2P51587 3418 aa23.14■■□□□ 1.3
ABR-231ENST00000574875 RLFQ13129 1914 aa23.14■■□□□ 1.3
ABR-231ENST00000574875 IGKV6D-41A0A0C4DH26 115 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 A0A0D9SFI3 127 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 SLC15A5A6NIM6 579 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 TRIM32Q13049 653 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 SAMD1Q6SPF0 538 aaPredicted RBP23.14■■□□□ 1.29
ABR-231ENST00000574875 TRIB2Q92519 343 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 ATG4CQ96DT6 458 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 DEFB118Q96PH6 123 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 MOV10L1Q9BXT6 1211 aaKnown RBP23.14■■□□□ 1.29
ABR-231ENST00000574875 SPATC1LQ9H0A9 340 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 PAK6Q9NQU5 681 aaPredicted RBP23.14■■□□□ 1.29
ABR-231ENST00000574875 IVNS1ABPQ9Y6Y0 642 aa23.14■■□□□ 1.29
ABR-231ENST00000574875 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.29
ABR-231ENST00000574875 RPTORQ8N122 1335 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 F5H6K3 240 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 TFRCP02786 760 aaKnown RBP23.13■■□□□ 1.29
ABR-231ENST00000574875 TSPY3P0CV98 308 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 TSPY8P0CW00 308 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 CAPN2P17655 700 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 TFAP4Q01664 338 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 KLRC3Q07444 240 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 MAP2K5Q13163 448 aa23.13■■□□□ 1.29
ABR-231ENST00000574875 NMIQ13287 307 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms