RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 USP17L22D6RA61 530 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 USP17L17D6RBQ6 530 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 USP17L19D6RCP7 530 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 USP17L20D6RJB6 530 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 ORC4O43929 436 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 HOXA7P31268 230 aaPredicted RBP20.43■□□□□ 0.86
CLDN7-207ENST00000574070 USP17L24Q0WX57 530 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 SIAH1Q8IUQ4 282 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 SPICE1Q8N0Z3 855 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 STAG1Q8WVM7 1258 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 CEP95Q96GE4 821 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 RPAP3Q9H6T3 665 aaPredicted RBP20.43■□□□□ 0.86
CLDN7-207ENST00000574070 VCPKMTQ9H867 229 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 TACC3Q9Y6A5 838 aa20.43■□□□□ 0.86
CLDN7-207ENST00000574070 PCP11498 1178 aaKnown RBP20.42■□□□□ 0.86
CLDN7-207ENST00000574070 PTH1RQ03431 593 aa20.42■□□□□ 0.86
CLDN7-207ENST00000574070 ARHGEF6Q15052 776 aa20.42■□□□□ 0.86
CLDN7-207ENST00000574070 ANKRD13CQ8N6S4 541 aa20.42■□□□□ 0.86
CLDN7-207ENST00000574070 TANGO6Q9C0B7 1094 aa20.42■□□□□ 0.86
CLDN7-207ENST00000574070 NYAP2Q9P242 653 aa20.42■□□□□ 0.86
CLDN7-207ENST00000574070 U3KPZ7 1027 aaPredicted RBP20.42■□□□□ 0.86
CLDN7-207ENST00000574070 ADGRA2Q96PE1 1338 aa20.42■□□□□ 0.86
CLDN7-207ENST00000574070 IGKV6D-41A0A0C4DH26 115 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 TTLL1O95922 423 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 FGRP09769 529 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 GCLCP48506 637 aaPredicted RBP20.41■□□□□ 0.86
CLDN7-207ENST00000574070 PPP4R3BQ5MIZ7 849 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 LPAR1Q92633 364 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 P2RX7Q99572 595 aaKnown RBP20.41■□□□□ 0.86
CLDN7-207ENST00000574070 MTMR4Q9NYA4 1195 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 STX8Q9UNK0 236 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 TRIM17Q9Y577 477 aa20.41■□□□□ 0.86
CLDN7-207ENST00000574070 HERVK_113P62684 666 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 SAMD1Q6SPF0 538 aaPredicted RBP20.4■□□□□ 0.86
CLDN7-207ENST00000574070 CATSPERGQ6ZRH7 1159 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 LRRC47Q8N1G4 583 aaKnown RBP20.4■□□□□ 0.86
CLDN7-207ENST00000574070 ESR2Q92731 530 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 PLIN4Q96Q06 1357 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 NBPF3Q9H094 633 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 EFCC1Q9HA90 598 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 ANO2Q9NQ90 1003 aa20.4■□□□□ 0.86
CLDN7-207ENST00000574070 NEDD4P46934 1319 aa20.39■□□□□ 0.85
CLDN7-207ENST00000574070 BCRP11274 1271 aa20.39■□□□□ 0.85
CLDN7-207ENST00000574070 LACTBP83111 547 aaPredicted RBP20.39■□□□□ 0.85
CLDN7-207ENST00000574070 KIAA1755Q5JYT7 1200 aa20.39■□□□□ 0.85
CLDN7-207ENST00000574070 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
CLDN7-207ENST00000574070 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
CLDN7-207ENST00000574070 GREB1LQ9C091 1923 aaPredicted RBP20.39■□□□□ 0.85
CLDN7-207ENST00000574070 F5H6K3 240 aa20.38■□□□□ 0.85
CLDN7-207ENST00000574070 WDR46O15213 610 aaKnown RBP20.38■□□□□ 0.85
CLDN7-207ENST00000574070 NMT2O60551 498 aa20.38■□□□□ 0.85
CLDN7-207ENST00000574070 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
CLDN7-207ENST00000574070 KLRC3Q07444 240 aa20.38■□□□□ 0.85
CLDN7-207ENST00000574070 HABP4Q5JVS0 413 aaKnown RBP20.38■□□□□ 0.85
CLDN7-207ENST00000574070 GTF3C2Q8WUA4 911 aaPredicted RBP20.38■□□□□ 0.85
CLDN7-207ENST00000574070 RBM8AQ9Y5S9 174 aaKnown RBP20.38■□□□□ 0.85
CLDN7-207ENST00000574070 FLOT1O75955 427 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 PSMC4P43686 418 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 TRDNQ13061 729 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 FAM110CQ1W6H9 321 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 OTOP1Q7RTM1 612 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 MAP4K1Q92918 833 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 KRT23Q9C075 422 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 ARHGAP39Q9C0H5 1083 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 CEP290O15078 2479 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 LAMA4Q16363 1823 aa20.37■□□□□ 0.85
CLDN7-207ENST00000574070 B4E1Z4 1266 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 KDM4AO75164 1064 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 NDUFB10O96000 172 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 FCGRTP55899 365 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 COG2Q14746 738 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 FAM83BQ5T0W9 1011 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
CLDN7-207ENST00000574070 MKL1Q969V6 931 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 CHMP4CQ96CF2 233 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 LSG1Q9H089 658 aaKnown RBP20.36■□□□□ 0.85
CLDN7-207ENST00000574070 CNNM2Q9H8M5 875 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 MTMR7Q9Y216 660 aa20.36■□□□□ 0.85
CLDN7-207ENST00000574070 CYP21A2P08686 494 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 SLFN13Q68D06 897 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 IQCA1Q86XH1 822 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 GPRC5AQ8NFJ5 357 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 NUP88Q99567 741 aaPredicted RBP20.35■□□□□ 0.85
CLDN7-207ENST00000574070 ZKSCAN3Q9BRR0 538 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 HOXC10Q9NYD6 342 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 RBBP6Q7Z6E9 1792 aaKnown RBP20.35■□□□□ 0.85
CLDN7-207ENST00000574070 MYH4Q9Y623 1939 aa20.35■□□□□ 0.85
CLDN7-207ENST00000574070 SPDYE16A6NNV3 312 aaPredicted RBP20.34■□□□□ 0.85
CLDN7-207ENST00000574070 PEX10O60683 326 aa20.34■□□□□ 0.85
CLDN7-207ENST00000574070 HOXD10P28358 340 aa20.34■□□□□ 0.85
CLDN7-207ENST00000574070 NT5C2P49902 561 aa20.34■□□□□ 0.85
CLDN7-207ENST00000574070 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
CLDN7-207ENST00000574070 CWC22Q9HCG8 908 aaKnown RBP20.34■□□□□ 0.85
CLDN7-207ENST00000574070 TCP11L1Q9NUJ3 509 aa20.34■□□□□ 0.85
CLDN7-207ENST00000574070 SYNPO2Q9UMS6 1093 aa20.34■□□□□ 0.85
CLDN7-207ENST00000574070 TNPO2O14787 897 aaKnown RBP20.33■□□□□ 0.85
CLDN7-207ENST00000574070 DSG3P32926 999 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms