RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 SH2D4AQ9H788 454 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 KANSL2Q9H9L4 492 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 CWC22Q9HCG8 908 aaKnown RBP21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 TMX2Q9Y320 296 aa21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 BAZ2AQ9UIF9 1905 aaKnown RBP21.23■□□□□ 0.99
CTDNEP1-207ENST00000572043 SPDYE16A6NNV3 312 aaPredicted RBP21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 CYP2B6P20813 491 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 WDR78Q5VTH9 848 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 RNF208Q9H0X6 261 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 VCPKMTQ9H867 229 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 BTBD7Q9P203 1132 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 GJD2Q9UKL4 321 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 RABGAP1Q9Y3P9 1069 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 ROBO3Q96MS0 1386 aa21.22■□□□□ 0.99
CTDNEP1-207ENST00000572043 VPS53Q5VIR6 699 aa21.21■□□□□ 0.99
CTDNEP1-207ENST00000572043 PXYLP1Q8TE99 480 aa21.21■□□□□ 0.99
CTDNEP1-207ENST00000572043 UNC93B1Q9H1C4 597 aa21.21■□□□□ 0.99
CTDNEP1-207ENST00000572043 A0A0D9SFI3 127 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 FLOT1O75955 427 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 MAPK4P31152 587 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 PPARAQ07869 468 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 COG2Q14746 738 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 GPR142Q7Z601 462 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 ZNF444Q8N0Y2 327 aaPredicted RBP21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 LPAR1Q92633 364 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 HTTP42858 3142 aa21.2■□□□□ 0.98
CTDNEP1-207ENST00000572043 FOXP2O15409 715 aa21.19■□□□□ 0.98
CTDNEP1-207ENST00000572043 NMIQ13287 307 aaPredicted RBP21.19■□□□□ 0.98
CTDNEP1-207ENST00000572043 NUDT12Q9BQG2 462 aa21.19■□□□□ 0.98
CTDNEP1-207ENST00000572043 ZNF287Q9HBT7 754 aa21.19■□□□□ 0.98
CTDNEP1-207ENST00000572043 HELLSQ9NRZ9 838 aa21.19■□□□□ 0.98
CTDNEP1-207ENST00000572043 SLC3A2P08195 630 aaKnown RBP21.18■□□□□ 0.98
CTDNEP1-207ENST00000572043 CCNA1P78396 465 aa21.18■□□□□ 0.98
CTDNEP1-207ENST00000572043 TRIM32Q13049 653 aa21.18■□□□□ 0.98
CTDNEP1-207ENST00000572043 MCMDC2Q4G0Z9 681 aa21.18■□□□□ 0.98
CTDNEP1-207ENST00000572043 FAM47AQ5JRC9 791 aa21.18■□□□□ 0.98
CTDNEP1-207ENST00000572043 PLEKHH3Q7Z736 793 aa21.18■□□□□ 0.98
CTDNEP1-207ENST00000572043 WDR46O15213 610 aaKnown RBP21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 CTDSPL2Q05D32 466 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 PDE4BQ07343 736 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 LBX2Q6XYB7 198 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 SOCS4Q8WXH5 440 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 SHISA4Q96DD7 197 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 ATG4CQ96DT6 458 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 GOPCQ9HD26 462 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 INCENPQ9NQS7 918 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 HOXC10Q9NYD6 342 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 CLIP2Q9UDT6 1046 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 MGAMO43451 1857 aa21.17■□□□□ 0.98
CTDNEP1-207ENST00000572043 GJB1P08034 283 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 TSPY3P0CV98 308 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 TSPY8P0CW00 308 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 DSG3P32926 999 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 PLS1Q14651 629 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 FAM83BQ5T0W9 1011 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 ZNF589Q86UQ0 364 aaPredicted RBP21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 TRIB2Q92519 343 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 CEP95Q96GE4 821 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 NUP88Q99567 741 aaPredicted RBP21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 OSBPL3Q9H4L5 887 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 FBXO28Q9NVF7 368 aa21.16■□□□□ 0.98
CTDNEP1-207ENST00000572043 HMGCRP04035 888 aa21.15■□□□□ 0.98
CTDNEP1-207ENST00000572043 SDSP20132 328 aa21.15■□□□□ 0.98
CTDNEP1-207ENST00000572043 TFAP4Q01664 338 aa21.15■□□□□ 0.98
CTDNEP1-207ENST00000572043 LRRC47Q8N1G4 583 aaKnown RBP21.15■□□□□ 0.98
CTDNEP1-207ENST00000572043 U2AF1L4Q8WU68 220 aaKnown RBP21.15■□□□□ 0.98
CTDNEP1-207ENST00000572043 DEFB118Q96PH6 123 aa21.15■□□□□ 0.98
CTDNEP1-207ENST00000572043 IGKV6D-41A0A0C4DH26 115 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 RGS2P41220 211 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 GJA8P48165 433 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 CCL14Q16627 93 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 MORN1Q5T089 497 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 CHMP4CQ96CF2 233 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 MOV10L1Q9BXT6 1211 aaKnown RBP21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 SPATC1LQ9H0A9 340 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 NYAP2Q9P242 653 aa21.14■□□□□ 0.97
CTDNEP1-207ENST00000572043 F5H6K3 240 aa21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 NDUFB10O96000 172 aa21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 ZKSCAN1P17029 563 aaPredicted RBP21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 PDE4AP27815 886 aa21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 KLRC3Q07444 240 aa21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 MTMR4Q9NYA4 1195 aa21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 IVNS1ABPQ9Y6Y0 642 aa21.13■□□□□ 0.97
CTDNEP1-207ENST00000572043 CCDC171Q6TFL3 1326 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 TFRCP02786 760 aaKnown RBP21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 HSPD1P10809 573 aaKnown RBP21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 ERCC3P19447 782 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 PTPREP23469 700 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 MAP2K5Q13163 448 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 CWC27Q6UX04 472 aaKnown RBP21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 NEDD1Q8NHV4 660 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 USP6NLQ92738 828 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 APBA2Q99767 749 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 DIAPH3Q9NSV4 1193 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 TACC3Q9Y6A5 838 aa21.12■□□□□ 0.97
CTDNEP1-207ENST00000572043 TSPY2A6NKD2 308 aa21.11■□□□□ 0.97
CTDNEP1-207ENST00000572043 SGPL1O95470 568 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms