RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 MBD4O95243 580 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 COL6A1P12109 1028 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 MYH7P12883 1935 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 COG2Q14746 738 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 WDR78Q5VTH9 848 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 TMEM179Q6ZVK1 233 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 NPLOC4Q8TAT6 608 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 GDF15Q99988 308 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
NDE1-203ENST00000570727 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
NDE1-203ENST00000570727 HOXC10Q9NYD6 342 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 SWAP70Q9UH65 585 aa17.85■□□□□ 0.45
NDE1-203ENST00000570727 CYP2D7A0A087X1C5 515 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 A0A1W2PPC1 479 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 IGHA2P01877 340 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 HOXC6P09630 235 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 AKR1B1P15121 316 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 GRB14Q14449 540 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 C12orf60Q5U649 245 aa17.84■□□□□ 0.45
NDE1-203ENST00000570727 ZMYND8Q9ULU4 1186 aaPredicted RBP17.84■□□□□ 0.45
NDE1-203ENST00000570727 USP17L12C9JPN9 530 aa17.83■□□□□ 0.44
NDE1-203ENST00000570727 USP17L21D6R901 530 aa17.83■□□□□ 0.44
NDE1-203ENST00000570727 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
NDE1-203ENST00000570727 BMP8BP34820 402 aa17.83■□□□□ 0.44
NDE1-203ENST00000570727 UBE3CQ15386 1083 aa17.83■□□□□ 0.44
NDE1-203ENST00000570727 MOV10L1Q9BXT6 1211 aaKnown RBP17.83■□□□□ 0.44
NDE1-203ENST00000570727 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.83■□□□□ 0.441e-7■■■■□ 25.1
NDE1-203ENST00000570727 TMX2Q9Y320 296 aa17.83■□□□□ 0.44
NDE1-203ENST00000570727 COL6A3P12111 3177 aa17.83■□□□□ 0.44
NDE1-203ENST00000570727 FRMPD3Q5JV73 1810 aa17.82■□□□□ 0.44
NDE1-203ENST00000570727 SOX1O00570 391 aaPredicted RBP17.82■□□□□ 0.44
NDE1-203ENST00000570727 CDK8P49336 464 aa17.82■□□□□ 0.44
NDE1-203ENST00000570727 MFSD14CQ5VZR4 134 aa17.82■□□□□ 0.44
NDE1-203ENST00000570727 CLEC10AQ8IUN9 316 aa17.82■□□□□ 0.44
NDE1-203ENST00000570727 LRRCC1Q9C099 1032 aa17.82■□□□□ 0.44
NDE1-203ENST00000570727 IVNS1ABPQ9Y6Y0 642 aa17.82■□□□□ 0.44
NDE1-203ENST00000570727 ZNFX1Q9P2E3 1918 aaKnown RBP17.82■□□□□ 0.44
NDE1-203ENST00000570727 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
NDE1-203ENST00000570727 SYN1P17600 705 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 DSG3P32926 999 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 ATP2B2Q01814 1243 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 TRPV1Q8NER1 839 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 CCDC17Q96LX7 622 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 TANGO6Q9C0B7 1094 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 SPATC1LQ9H0A9 340 aa17.81■□□□□ 0.44
NDE1-203ENST00000570727 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
NDE1-203ENST00000570727 PARP14Q460N5 1801 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 STRNO43815 780 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 CYP2C19P33261 490 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 LRRC26Q2I0M4 334 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 CTR9Q6PD62 1173 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 C16orf86Q6ZW13 317 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 LPAR1Q92633 364 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 VCPKMTQ9H867 229 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 SLC4A4Q9Y6R1 1079 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 A0A0G2JMZ2 1700 aa17.8■□□□□ 0.44
NDE1-203ENST00000570727 COBLO75128 1261 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 ERCC3P19447 782 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 ADORA2AP29274 412 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 ICA1Q05084 483 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 SHCBP1Q8NEM2 672 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 LRCH3Q96II8 777 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 ARHGEF10LQ9HCE6 1279 aa17.79■□□□□ 0.44
NDE1-203ENST00000570727 DDX20Q9UHI6 824 aaKnown RBP17.79■□□□□ 0.44
NDE1-203ENST00000570727 FLOT1O75955 427 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 EEF2P13639 858 aaKnown RBP17.78■□□□□ 0.44
NDE1-203ENST00000570727 MAGEA10P43363 369 aaPredicted RBP17.78■□□□□ 0.44
NDE1-203ENST00000570727 ZSCAN25Q6NSZ9 544 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 DPP9Q86TI2 863 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 ATG4CQ96DT6 458 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
NDE1-203ENST00000570727 ECHDC1Q9NTX5 307 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 ADAMTS5Q9UNA0 930 aa17.78■□□□□ 0.44
NDE1-203ENST00000570727 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.44
NDE1-203ENST00000570727 ZNF236Q9UL36 1845 aa17.77■□□□□ 0.44
NDE1-203ENST00000570727 CYBAP13498 195 aa17.77■□□□□ 0.44
NDE1-203ENST00000570727 CNGA1P29973 690 aa17.77■□□□□ 0.44
NDE1-203ENST00000570727 OLFML2BQ68BL8 750 aa17.77■□□□□ 0.44
NDE1-203ENST00000570727 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.44
NDE1-203ENST00000570727 DCTPP1Q9H773 170 aa17.77■□□□□ 0.44
NDE1-203ENST00000570727 SMCHD1A6NHR9 2005 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 WDR46O15213 610 aaKnown RBP17.76■□□□□ 0.43
NDE1-203ENST00000570727 MSCO60682 206 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 PLS1Q14651 629 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 TMEM132BQ14DG7 1078 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 AMOTL1Q8IY63 956 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 SENP6Q9GZR1 1112 aaPredicted RBP17.76■□□□□ 0.43
NDE1-203ENST00000570727 MROH8Q9H579 483 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 SH2D4AQ9H788 454 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 KANSL2Q9H9L4 492 aa17.76■□□□□ 0.43
NDE1-203ENST00000570727 A0A0C4DFX4 3053 aa17.75■□□□□ 0.43
NDE1-203ENST00000570727 GSG1L2A8MUP6 293 aa17.75■□□□□ 0.43
NDE1-203ENST00000570727 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
NDE1-203ENST00000570727 NCAPG2Q86XI2 1143 aa17.75■□□□□ 0.43
NDE1-203ENST00000570727 ABRAQ8N0Z2 381 aa17.75■□□□□ 0.43
NDE1-203ENST00000570727 FBXO28Q9NVF7 368 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms