RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	PPARA	Q07869	468 aa		29	■■■□□ 2.23
GGA2-215	ENST00000569189	NMI	Q13287	307 aa	Predicted RBP	29	■■■□□ 2.23
GGA2-215	ENST00000569189	MCMDC2	Q4G0Z9	681 aa		29	■■■□□ 2.23
GGA2-215	ENST00000569189	LPAR1	Q92633	364 aa		29	■■■□□ 2.23
GGA2-215	ENST00000569189	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	29	■■■□□ 2.23
GGA2-215	ENST00000569189	KIAA1755	Q5JYT7	1200 aa		28.99	■■■□□ 2.23
GGA2-215	ENST00000569189	VPS53	Q5VIR6	699 aa		28.99	■■■□□ 2.23
GGA2-215	ENST00000569189	POTEE	Q6S8J3	1075 aa		28.99	■■■□□ 2.23
GGA2-215	ENST00000569189	TANGO6	Q9C0B7	1094 aa		28.99	■■■□□ 2.23
GGA2-215	ENST00000569189	VCPKMT	Q9H867	229 aa		28.99	■■■□□ 2.23
GGA2-215	ENST00000569189		A0A0G2JMZ2	1700 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	PRDM1	O75626	825 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	SLC3A2	P08195	630 aa	Known RBP	28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	PDE4B	Q07343	736 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	LBX2	Q6XYB7	198 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	ZNF444	Q8N0Y2	327 aa	Predicted RBP	28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	SLAIN1	Q8ND83	568 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	TMEM106C	Q9BVX2	250 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	RABGAP1	Q9Y3P9	1069 aa		28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	TNRC18	O15417	2968 aa	Predicted RBP	28.98	■■■□□ 2.23
GGA2-215	ENST00000569189	POTEF	A5A3E0	1075 aa		28.97	■■■□□ 2.23
GGA2-215	ENST00000569189	SPDYE16	A6NNV3	312 aa	Predicted RBP	28.97	■■■□□ 2.23
GGA2-215	ENST00000569189	SDS	P20132	328 aa		28.97	■■■□□ 2.23
GGA2-215	ENST00000569189	PDE4A	P27815	886 aa		28.97	■■■□□ 2.23
GGA2-215	ENST00000569189	IRF5	Q13568	498 aa		28.97	■■■□□ 2.23
GGA2-215	ENST00000569189	SPICE1	Q8N0Z3	855 aa		28.97	■■■□□ 2.23
GGA2-215	ENST00000569189	ADCY3	O60266	1144 aa		28.96	■■■□□ 2.23
GGA2-215	ENST00000569189	MYC	P01106	439 aa	Predicted RBP	28.96	■■■□□ 2.23
GGA2-215	ENST00000569189		Q3C1V9	767 aa		28.96	■■■□□ 2.23
GGA2-215	ENST00000569189	CCDC171	Q6TFL3	1326 aa		28.95	■■■□□ 2.23
GGA2-215	ENST00000569189	WDR46	O15213	610 aa	Known RBP	28.95	■■■□□ 2.22
GGA2-215	ENST00000569189	CNMD	O75829	334 aa		28.95	■■■□□ 2.22
GGA2-215	ENST00000569189	MAPK4	P31152	587 aa		28.95	■■■□□ 2.22
GGA2-215	ENST00000569189	ZNF589	Q86UQ0	364 aa	Predicted RBP	28.95	■■■□□ 2.22
GGA2-215	ENST00000569189	GOPC	Q9HD26	462 aa		28.95	■■■□□ 2.22
GGA2-215	ENST00000569189	PLIN4	Q96Q06	1357 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	COG2	Q14746	738 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	ALX1	Q15699	326 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	PXYLP1	Q8TE99	480 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	PORCN	Q9H237	461 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	HOXC10	Q9NYD6	342 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	NYAP2	Q9P242	653 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	BIN2	Q9UBW5	565 aa	Predicted RBP	28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	PDE4DIP	Q5VU43	2346 aa		28.94	■■■□□ 2.22
GGA2-215	ENST00000569189	IGKV6D-41	A0A0C4DH26	115 aa		28.93	■■■□□ 2.22
GGA2-215	ENST00000569189	ELN	P15502	786 aa		28.93	■■■□□ 2.22
GGA2-215	ENST00000569189	CCNA1	P78396	465 aa		28.93	■■■□□ 2.22
GGA2-215	ENST00000569189	CCAR1	Q8IX12	1150 aa	Known RBP	28.93	■■■□□ 2.22
GGA2-215	ENST00000569189	DIAPH3	Q9NSV4	1193 aa		28.93	■■■□□ 2.22
GGA2-215	ENST00000569189	GJD2	Q9UKL4	321 aa		28.93	■■■□□ 2.22
GGA2-215	ENST00000569189	HSPD1	P10809	573 aa	Known RBP	28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	MFAP1	P55081	439 aa	Known RBP	28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	UBXN2A	P68543	259 aa		28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	CTDSPL2	Q05D32	466 aa		28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	MTFR1	Q15390	333 aa		28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	BTBD7	Q9P203	1132 aa		28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	COL11A1	P12107	1806 aa	Predicted RBP	28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	ZMYM6	O95789	1325 aa		28.92	■■■□□ 2.22
GGA2-215	ENST00000569189	HIP1	O00291	1037 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	RAD21	O60216	631 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	FLOT1	O75955	427 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	TSPY3	P0CV98	308 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	TSPY8	P0CW00	308 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	NEDD1	Q8NHV4	660 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	ANAPC4	Q9UJX5	808 aa		28.91	■■■□□ 2.22
GGA2-215	ENST00000569189	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	28.91	■■■□□ 2.22	1e-6	■□□□□ 10.4
GGA2-215	ENST00000569189	FGA	P02671	866 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	DSG3	P32926	999 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	TTC22	Q5TAA0	569 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	GPR142	Q7Z601	462 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	SOCS4	Q8WXH5	440 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	CEP95	Q96GE4	821 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	MKI67	P46013	3256 aa	Known RBP	28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	LAMA4	Q16363	1823 aa		28.9	■■■□□ 2.22
GGA2-215	ENST00000569189	EN2	P19622	333 aa	Predicted RBP	28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	TFAP4	Q01664	338 aa		28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	FAM47A	Q5JRC9	791 aa		28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	CWC27	Q6UX04	472 aa	Known RBP	28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	PLEKHH3	Q7Z736	793 aa		28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	NUDT12	Q9BQG2	462 aa		28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	CWC22	Q9HCG8	908 aa	Known RBP	28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	MTMR4	Q9NYA4	1195 aa		28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	CLIP2	Q9UDT6	1046 aa		28.89	■■■□□ 2.22
GGA2-215	ENST00000569189	TTLL1	O95922	423 aa		28.88	■■■□□ 2.21
GGA2-215	ENST00000569189	INHA	P05111	366 aa		28.88	■■■□□ 2.21
GGA2-215	ENST00000569189	MB21D1	Q8N884	522 aa		28.88	■■■□□ 2.21
GGA2-215	ENST00000569189	CCL5	P13501	91 aa		28.87	■■■□□ 2.21
GGA2-215	ENST00000569189	GSPT1	P15170	499 aa	Known RBP	28.87	■■■□□ 2.21
GGA2-215	ENST00000569189	FAM83B	Q5T0W9	1011 aa		28.87	■■■□□ 2.21
GGA2-215	ENST00000569189	ATG4C	Q96DT6	458 aa		28.87	■■■□□ 2.21
GGA2-215	ENST00000569189	INCENP	Q9NQS7	918 aa		28.87	■■■□□ 2.21
GGA2-215	ENST00000569189	WDR78	Q5VTH9	848 aa		28.86	■■■□□ 2.21
GGA2-215	ENST00000569189	SAMD1	Q6SPF0	538 aa	Predicted RBP	28.86	■■■□□ 2.21
GGA2-215	ENST00000569189	MKL1	Q969V6	931 aa		28.86	■■■□□ 2.21
GGA2-215	ENST00000569189	RNF208	Q9H0X6	261 aa		28.86	■■■□□ 2.21
GGA2-215	ENST00000569189	SYNPO2	Q9UMS6	1093 aa		28.86	■■■□□ 2.21
GGA2-215	ENST00000569189	TACC3	Q9Y6A5	838 aa		28.86	■■■□□ 2.21
GGA2-215	ENST00000569189	TSPY2	A6NKD2	308 aa		28.85	■■■□□ 2.21
GGA2-215	ENST00000569189		F5H6K3	240 aa		28.85	■■■□□ 2.21
GGA2-215	ENST00000569189	ORC4	O43929	436 aa		28.85	■■■□□ 2.21

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