RNA–Protein interactions for RNA: ENST00000568622.1

KIAA0556-208, Transcript of KIAA0556, humanhuman

TSL 2

Gene KIAA0556, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0556-208ENST00000568622 HOXC10Q9NYD6 342 aa13.51□□□□□ -0.25
KIAA0556-208ENST00000568622 IVNS1ABPQ9Y6Y0 642 aa13.51□□□□□ -0.25
KIAA0556-208ENST00000568622 ZNF532Q9HCE3 1301 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 COBLO75128 1261 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 ADORA2AP29274 412 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 TMEM179Q6ZVK1 233 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 ABRAQ8N0Z2 381 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 LCORLQ8N3X6 602 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 MB21D1Q8N884 522 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 SENP6Q9GZR1 1112 aaPredicted RBP13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 TMX2Q9Y320 296 aa13.5□□□□□ -0.25
KIAA0556-208ENST00000568622 CUL9Q8IWT3 2517 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 PARP14Q460N5 1801 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 CYP2D6P10635 497 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 ERCC3P19447 782 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 DSG3P32926 999 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 WDR78Q5VTH9 848 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
KIAA0556-208ENST00000568622 DNAH12Q6ZR08 3092 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 ROBO3Q96MS0 1386 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 SEPT4O43236 478 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 ADD2P35612 726 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 CLASRPQ8N2M8 674 aaKnown RBP13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 PANK1Q8TE04 598 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 GUCD1Q96NT3 240 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 MROH8Q9H579 483 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 A0A0C4DFX4 3053 aa13.48□□□□□ -0.25
KIAA0556-208ENST00000568622 SMIM22K7EJ46 135 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 GOLIM4O00461 696 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 AKR1B1P15121 316 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 RTP1P59025 263 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 HNRNPUQ00839 825 aaKnown RBP eCLIP13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 DPP9Q86TI2 863 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 ARRDC4Q8NCT1 418 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 ATG4CQ96DT6 458 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 DYNLL2Q96FJ2 89 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 MAML3Q96JK9 1138 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 ZBTB40Q9NUA8 1239 aa13.47□□□□□ -0.25
KIAA0556-208ENST00000568622 WDR46O15213 610 aaKnown RBP13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 PRKAB2O43741 272 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 ATP5JP18859 108 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 CNGA1P29973 690 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 TMEM132BQ14DG7 1078 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 SLFNL1Q499Z3 407 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 C12orf60Q5U649 245 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 CLEC10AQ8IUN9 316 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 TANGO6Q9C0B7 1094 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 ARMT1Q9H993 441 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
KIAA0556-208ENST00000568622 GREB1LQ9C091 1923 aaPredicted RBP13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 ICA1Q05084 483 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 C16orf86Q6ZW13 317 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 REPS2Q8NFH8 660 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 LBHD1Q9BQE6 289 aaPredicted RBP13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
KIAA0556-208ENST00000568622 FLOT1O75955 427 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 MBD4O95243 580 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 SLC25A27O95847 323 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 CHGBP05060 677 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 IFIT2P09913 472 aaKnown RBP13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 CDK8P49336 464 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 LRRC41Q15345 812 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 FAM47AQ5JRC9 791 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 SPICE1Q8N0Z3 855 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 HAUS7Q99871 368 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 PAG1Q9NWQ8 432 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 SLC5A4Q9NY91 659 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 ZNF214Q9UL59 606 aaPredicted RBP13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 DIS3Q9Y2L1 958 aaKnown RBP13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 LAMA2P24043 3122 aaKnown RBP13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 UNC80Q8N2C7 3258 aa13.44□□□□□ -0.26
KIAA0556-208ENST00000568622 CYP2D7A0A087X1C5 515 aa13.43□□□□□ -0.26
KIAA0556-208ENST00000568622 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms