RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 B4GALNT3Q6L9W6 998 aa35.12■■■■□ 3.21
RAB40C-211ENST00000568586 VCPKMTQ9H867 229 aa35.12■■■■□ 3.21
RAB40C-211ENST00000568586 SPDYE16A6NNV3 312 aaPredicted RBP35.11■■■■□ 3.21
RAB40C-211ENST00000568586 GREB1LQ9C091 1923 aaPredicted RBP35.1■■■■□ 3.21
RAB40C-211ENST00000568586 FOXP2O15409 715 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 EEF2P13639 858 aaKnown RBP35.1■■■■□ 3.21
RAB40C-211ENST00000568586 ELNP15502 786 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 COG2Q14746 738 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 PLEKHM2Q8IWE5 1019 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 PAGR1Q9BTK6 254 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 PORCNQ9H237 461 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 HELLSQ9NRZ9 838 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 HOXC10Q9NYD6 342 aa35.1■■■■□ 3.21
RAB40C-211ENST00000568586 MYCP01106 439 aaPredicted RBP35.09■■■■□ 3.21
RAB40C-211ENST00000568586 GJB1P08034 283 aa35.09■■■■□ 3.21
RAB40C-211ENST00000568586 CCL5P13501 91 aa35.09■■■■□ 3.21
RAB40C-211ENST00000568586 MKNK2Q9HBH9 465 aa35.09■■■■□ 3.21
RAB40C-211ENST00000568586 ZNF287Q9HBT7 754 aa35.09■■■■□ 3.21
RAB40C-211ENST00000568586 BIN2Q9UBW5 565 aaPredicted RBP35.09■■■■□ 3.21
RAB40C-211ENST00000568586 USP6NLQ92738 828 aa35.08■■■■□ 3.21
RAB40C-211ENST00000568586 PLXNB2O15031 1838 aa35.07■■■■□ 3.2
RAB40C-211ENST00000568586 INHAP05111 366 aa35.07■■■■□ 3.2
RAB40C-211ENST00000568586 XRCC5P13010 732 aaKnown RBP35.07■■■■□ 3.2
RAB40C-211ENST00000568586 SOCS4Q8WXH5 440 aa35.07■■■■□ 3.2
RAB40C-211ENST00000568586 BTBD7Q9P203 1132 aa35.07■■■■□ 3.2
RAB40C-211ENST00000568586 RLFQ13129 1914 aa35.06■■■■□ 3.2
RAB40C-211ENST00000568586 IGKV6D-41A0A0C4DH26 115 aa35.06■■■■□ 3.2
RAB40C-211ENST00000568586 WDR46O15213 610 aaKnown RBP35.06■■■■□ 3.2
RAB40C-211ENST00000568586 CCNA1P78396 465 aa35.06■■■■□ 3.2
RAB40C-211ENST00000568586 NKX2-3Q8TAU0 364 aa35.06■■■■□ 3.2
RAB40C-211ENST00000568586 NAPBQ9H115 298 aa35.06■■■■□ 3.2
RAB40C-211ENST00000568586 NYAP2Q9P242 653 aa35.06■■■■□ 3.2
RAB40C-211ENST00000568586 GJA8P48165 433 aa35.05■■■■□ 3.2
RAB40C-211ENST00000568586 MORN1Q5T089 497 aa35.05■■■■□ 3.2
RAB40C-211ENST00000568586 CCDC129Q6ZRS4 1044 aa35.05■■■■□ 3.2
RAB40C-211ENST00000568586 GPR142Q7Z601 462 aa35.05■■■■□ 3.2
RAB40C-211ENST00000568586 NUDT12Q9BQG2 462 aa35.05■■■■□ 3.2
RAB40C-211ENST00000568586 RNF208Q9H0X6 261 aa35.05■■■■□ 3.2
RAB40C-211ENST00000568586 PLEKHH3Q7Z736 793 aa35.04■■■■□ 3.2
RAB40C-211ENST00000568586 SHISA4Q96DD7 197 aa35.04■■■■□ 3.2
RAB40C-211ENST00000568586 TANGO6Q9C0B7 1094 aa35.04■■■■□ 3.2
RAB40C-211ENST00000568586 UNC93B1Q9H1C4 597 aa35.04■■■■□ 3.2
RAB40C-211ENST00000568586 DSG3P32926 999 aa35.03■■■■□ 3.2
RAB40C-211ENST00000568586 PPARAQ07869 468 aa35.03■■■■□ 3.2
RAB40C-211ENST00000568586 ALX1Q15699 326 aa35.03■■■■□ 3.2
RAB40C-211ENST00000568586 ZNF444Q8N0Y2 327 aaPredicted RBP35.03■■■■□ 3.2
RAB40C-211ENST00000568586 SPICE1Q8N0Z3 855 aa35.03■■■■□ 3.2
RAB40C-211ENST00000568586 MB21D1Q8N884 522 aa35.03■■■■□ 3.2
RAB40C-211ENST00000568586 HMGCRP04035 888 aa35.02■■■■□ 3.2
RAB40C-211ENST00000568586 CAPN2P17655 700 aa35.02■■■■□ 3.2
RAB40C-211ENST00000568586 MCMDC2Q4G0Z9 681 aa35.02■■■■□ 3.2
RAB40C-211ENST00000568586 CCAR1Q8IX12 1150 aaKnown RBP35.02■■■■□ 3.2
RAB40C-211ENST00000568586 STK11IPQ8N1F8 1099 aa35.02■■■■□ 3.2
RAB40C-211ENST00000568586 GOPCQ9HD26 462 aa35.02■■■■□ 3.2
RAB40C-211ENST00000568586 SLC3A2P08195 630 aaKnown RBP35.01■■■■□ 3.2
RAB40C-211ENST00000568586 PDE4BQ07343 736 aa35.01■■■■□ 3.2
RAB40C-211ENST00000568586 MKL1Q969V6 931 aa35.01■■■■□ 3.2
RAB40C-211ENST00000568586 FAM227BQ96M60 508 aa35.01■■■■□ 3.2
RAB40C-211ENST00000568586 PAK6Q9NQU5 681 aaPredicted RBP35.01■■■■□ 3.2
RAB40C-211ENST00000568586 SYNPO2Q9UMS6 1093 aa35.01■■■■□ 3.2
RAB40C-211ENST00000568586 ADAMTS5Q9UNA0 930 aa35.01■■■■□ 3.2
RAB40C-211ENST00000568586 PLIN4Q96Q06 1357 aa35■■■■□ 3.19
RAB40C-211ENST00000568586 A0A0D9SFI3 127 aa35■■■■□ 3.19
RAB40C-211ENST00000568586 ATP2B2Q01814 1243 aa35■■■■□ 3.19
RAB40C-211ENST00000568586 VPS53Q5VIR6 699 aa35■■■■□ 3.19
RAB40C-211ENST00000568586 ANAPC4Q9UJX5 808 aa35■■■■□ 3.19
RAB40C-211ENST00000568586 A0A0G2JMZ2 1700 aa35■■■■□ 3.19
RAB40C-211ENST00000568586 PRDM1O75626 825 aa34.99■■■■□ 3.19
RAB40C-211ENST00000568586 FLOT1O75955 427 aa34.99■■■■□ 3.19
RAB40C-211ENST00000568586 TRMT44Q8IYL2 757 aaKnown RBP34.99■■■■□ 3.19
RAB40C-211ENST00000568586 NEDD1Q8NHV4 660 aa34.99■■■■□ 3.19
RAB40C-211ENST00000568586 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.99■■■■□ 3.194e-6■■■□□ 15.8
RAB40C-211ENST00000568586 TRIM6-TRIM34B2RNG4 842 aa34.98■■■■□ 3.19
RAB40C-211ENST00000568586 CYP2B6P20813 491 aa34.98■■■■□ 3.19
RAB40C-211ENST00000568586 U2AF1L4Q8WU68 220 aaKnown RBP34.98■■■■□ 3.19
RAB40C-211ENST00000568586 TRIB2Q92519 343 aa34.98■■■■□ 3.19
RAB40C-211ENST00000568586 MTMR4Q9NYA4 1195 aa34.98■■■■□ 3.19
RAB40C-211ENST00000568586 SLC15A5A6NIM6 579 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 SGPL1O95470 568 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 PTPREP23469 700 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 RGS2P41220 211 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 MAP3K21Q5TCX8 1036 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 UBE2Q1Q7Z7E8 422 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 SHCBP1Q8NEM2 672 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 SPATC1LQ9H0A9 340 aa34.97■■■■□ 3.19
RAB40C-211ENST00000568586 MAP2K5Q13163 448 aa34.96■■■■□ 3.19
RAB40C-211ENST00000568586 NMIQ13287 307 aaPredicted RBP34.96■■■■□ 3.19
RAB40C-211ENST00000568586 ATG4CQ96DT6 458 aa34.96■■■■□ 3.19
RAB40C-211ENST00000568586 CEP95Q96GE4 821 aa34.96■■■■□ 3.19
RAB40C-211ENST00000568586 MOV10L1Q9BXT6 1211 aaKnown RBP34.96■■■■□ 3.19
RAB40C-211ENST00000568586 HOXC6P09630 235 aa34.95■■■■□ 3.19
RAB40C-211ENST00000568586 FGRP09769 529 aa34.95■■■■□ 3.19
RAB40C-211ENST00000568586 SDSP20132 328 aa34.95■■■■□ 3.19
RAB40C-211ENST00000568586 PRPF38BQ5VTL8 546 aaKnown RBP34.95■■■■□ 3.19
RAB40C-211ENST00000568586 RILPL2Q969X0 211 aa34.95■■■■□ 3.19
RAB40C-211ENST00000568586 ZMYM6O95789 1325 aa34.95■■■■□ 3.19
RAB40C-211ENST00000568586 PARP14Q460N5 1801 aa34.95■■■■□ 3.18
RAB40C-211ENST00000568586 F5H6K3 240 aa34.94■■■■□ 3.18
RAB40C-211ENST00000568586 KLRC3Q07444 240 aa34.94■■■■□ 3.18
RAB40C-211ENST00000568586 GRB14Q14449 540 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms