RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 CCL15Q16663 113 aa16.78■□□□□ 0.28
NEIL1-219ENST00000568519 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
NEIL1-219ENST00000568519 ANKRD23Q86SG2 305 aa16.78■□□□□ 0.28
NEIL1-219ENST00000568519 SH3TC2Q8TF17 1288 aa16.78■□□□□ 0.28
NEIL1-219ENST00000568519 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
NEIL1-219ENST00000568519 TSPY2A6NKD2 308 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 PRDM1O75626 825 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 TFAP4Q01664 338 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 TRDNQ13061 729 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 MOGSQ13724 837 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 BRI3BPQ8WY22 251 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 LPAR1Q92633 364 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 KCNB2Q92953 911 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 MKL1Q969V6 931 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 MTA3Q9BTC8 594 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 MTMR4Q9NYA4 1195 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 TMX2Q9Y320 296 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
NEIL1-219ENST00000568519 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
NEIL1-219ENST00000568519 SLC27A2O14975 620 aa16.76■□□□□ 0.27
NEIL1-219ENST00000568519 RANBP6O60518 1105 aaKnown RBP16.76■□□□□ 0.27
NEIL1-219ENST00000568519 TTLL1O95922 423 aa16.76■□□□□ 0.27
NEIL1-219ENST00000568519 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.27
NEIL1-219ENST00000568519 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
NEIL1-219ENST00000568519 CREB3L3Q68CJ9 461 aa16.76■□□□□ 0.27
NEIL1-219ENST00000568519 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
NEIL1-219ENST00000568519 TTC14Q96N46 770 aa16.76■□□□□ 0.27
NEIL1-219ENST00000568519 NEDD4P46934 1319 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
NEIL1-219ENST00000568519 MTMR2Q13614 643 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 KRT32Q14532 448 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 SLC9C1Q4G0N8 1177 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 SIAH1Q8IUQ4 282 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 NCOA7Q8NI08 942 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 FEZ1Q99689 392 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 TMOD4Q9NZQ9 345 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.75■□□□□ 0.27
NEIL1-219ENST00000568519 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
NEIL1-219ENST00000568519 COL6A3P12111 3177 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 E7EWF7 191 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
NEIL1-219ENST00000568519 HOXA7P31268 230 aaPredicted RBP16.74■□□□□ 0.27
NEIL1-219ENST00000568519 HSPA4P34932 840 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 RALYLQ86SE5 291 aaKnown RBP16.74■□□□□ 0.27
NEIL1-219ENST00000568519 CCDC84Q86UT8 332 aaPredicted RBP16.74■□□□□ 0.27
NEIL1-219ENST00000568519 DGKHQ86XP1 1220 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 ANKS1AQ92625 1134 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 VCPKMTQ9H867 229 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 GOPCQ9HD26 462 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
NEIL1-219ENST00000568519 MYH4Q9Y623 1939 aa16.74■□□□□ 0.27
NEIL1-219ENST00000568519 A0A0C4DFX4 3053 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 A0A1W2PRG0 241 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 MCCP23508 829 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 HMGCS2P54868 508 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 TAF1CQ15572 869 aaPredicted RBP16.73■□□□□ 0.27
NEIL1-219ENST00000568519 FAM47AQ5JRC9 791 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
NEIL1-219ENST00000568519 GPAT2Q6NUI2 795 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 GMCL1P1Q8NEA9 526 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 USP26Q9BXU7 913 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
NEIL1-219ENST00000568519 WDR19Q8NEZ3 1342 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 KDM4AO75164 1064 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
NEIL1-219ENST00000568519 MTFR1Q15390 333 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 ACER1Q8TDN7 264 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 INCENPQ9NQS7 918 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 ZSWIM5Q9P217 1185 aa16.72■□□□□ 0.27
NEIL1-219ENST00000568519 B4E1Z4 1266 aa16.71■□□□□ 0.27
NEIL1-219ENST00000568519 WDR46O15213 610 aaKnown RBP16.71■□□□□ 0.27
NEIL1-219ENST00000568519 TOP1P11387 765 aaKnown RBP16.71■□□□□ 0.27
NEIL1-219ENST00000568519 CTGFP29279 349 aa16.71■□□□□ 0.27
NEIL1-219ENST00000568519 C8orf34Q49A92 452 aa16.71■□□□□ 0.27
NEIL1-219ENST00000568519 GADL1Q6ZQY3 521 aa16.71■□□□□ 0.27
NEIL1-219ENST00000568519 MB21D2Q8IYB1 491 aaPredicted RBP16.71■□□□□ 0.27
NEIL1-219ENST00000568519 GTF3C2Q8WUA4 911 aaPredicted RBP16.71■□□□□ 0.27
NEIL1-219ENST00000568519 ZSCAN10Q96SZ4 725 aaPredicted RBP16.71■□□□□ 0.27
NEIL1-219ENST00000568519 PARK7Q99497 189 aaKnown RBP16.71■□□□□ 0.27
NEIL1-219ENST00000568519 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 PDHXO00330 501 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 VCAM1P19320 739 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 ANAPC15P60006 121 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 SART3Q15020 963 aaKnown RBP16.7■□□□□ 0.26
NEIL1-219ENST00000568519 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 STOX1Q6ZVD7 989 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 IL17RAQ96F46 866 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 GMCL1Q96IK5 515 aa16.7■□□□□ 0.26
NEIL1-219ENST00000568519 UBAC1Q9BSL1 405 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms