RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 LZTS2Q9BRK4 669 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CRNKL1Q9BZJ0 848 aaKnown RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 FTOQ9C0B1 505 aaKnown RBP eCLIP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CUEDC2Q9H467 287 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 PIH1D3Q9NQM4 214 aaKnown RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC87Q9NVE4 849 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CWC15Q9P013 229 aaKnown RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 CALCOCO1Q9P1Z2 691 aa8.67□□□□□ -1.02
ATXN3-250ENST00000568290 ZNF215Q9UL58 517 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-250ENST00000568290 TIAM2Q8IVF5 1701 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 KIF28PB7ZC32 967 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 POLR2DO15514 142 aaKnown RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 WDHD1O75717 1129 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 URI1O94763 535 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 FGFR1OPO95684 399 aaKnown RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 CYP7A1P22680 504 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 LONP1P36776 959 aaKnown RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 PHKA1P46020 1223 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 SARSP49591 514 aaKnown RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 GSTO1P78417 241 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 RRP12Q5JTH9 1297 aaKnown RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 ARMCX5Q6P1M9 558 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 MSL3Q8N5Y2 521 aaKnown RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 RABGGTAQ92696 567 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 LRRC27Q9C0I9 530 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 ARFGAP3Q9NP61 516 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 ARPP21Q9UBL0 812 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-250ENST00000568290 PPP2R2CQ9Y2T4 447 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 NFE2L3Q9Y4A8 694 aa8.66□□□□□ -1.02
ATXN3-250ENST00000568290 H7C1D1 291 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 FOXP2O15409 715 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 MAP3K7O43318 606 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 ORC4O43929 436 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 LDHCP07864 332 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 ZSCAN20P17040 1043 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-250ENST00000568290 COL9A1P20849 921 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 GPTP24298 496 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 CDC27P30260 824 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 EIF5P55010 431 aaKnown RBP8.65□□□□□ -1.02
ATXN3-250ENST00000568290 GNG11P61952 73 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 AMPD3Q01432 767 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 PNOCQ13519 176 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 SCARF1Q14162 830 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 LONRF3Q496Y0 759 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 MAP9Q49MG5 647 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 ARHGAP29Q52LW3 1261 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 OTUD7BQ6GQQ9 843 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 POTEGQ6S5H5 508 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
ATXN3-250ENST00000568290 SPATA20Q8TB22 786 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 PHKBQ93100 1093 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 NUP58Q9BVL2 599 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 FANCLQ9NW38 375 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 MAGEC2Q9UBF1 373 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-250ENST00000568290 FBXO2Q9UK22 296 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-250ENST00000568290 MAN1B1Q9UKM7 699 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 ANKRD36CQ5JPF3 1778 aa8.65□□□□□ -1.02
ATXN3-250ENST00000568290 MYH3P11055 1940 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 COL14A1Q05707 1796 aaKnown RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 TNKSO95271 1327 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 NEDD4P46934 1319 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 SYNRGQ9UMZ2 1314 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 ARAP2Q8WZ64 1704 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 BICDL2A1A5D9 508 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 POTEMA6NI47 508 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 BTBD18B2RXH4 712 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 H2AFXP16104 143 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 ZNF18P17022 549 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 PBX2P40425 430 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 KRT83P78385 493 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 TBX2Q13207 712 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 ELF2Q15723 593 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 WHAMMP3Q1A5X7 153 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 CYP26C1Q6V0L0 522 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 RETREG2Q8NC44 543 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 ZC3H15Q8WU90 426 aaKnown RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 ARMT1Q9H993 441 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-250ENST00000568290 RWDD2AQ9UIY3 292 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 LRP5O75197 1615 aa8.64□□□□□ -1.03
ATXN3-250ENST00000568290 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 C4BP0C0L5 1744 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 MROH7-TTC4A0A0A0MT08 1334 aa8.63□□□□□ -1.03
ATXN3-250ENST00000568290 CTAGE9A4FU28 777 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms