RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	TMED8	Q6PL24	325 aa	Predicted RBP	13.87	□□□□□ -0.19
TCF4-238	ENST00000568169	ARRDC4	Q8NCT1	418 aa		13.87	□□□□□ -0.19
TCF4-238	ENST00000568169	EAF2	Q96CJ1	260 aa	Predicted RBP	13.87	□□□□□ -0.19
TCF4-238	ENST00000568169	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.87	□□□□□ -0.19
TCF4-238	ENST00000568169	PRKAG2	Q9UGJ0	569 aa		13.87	□□□□□ -0.19
TCF4-238	ENST00000568169	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.87	□□□□□ -0.19
TCF4-238	ENST00000568169	STRN	O43815	780 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	PLCD1	P51178	756 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	GABPA	Q06546	454 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	MAP3K12	Q12852	859 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	COG2	Q14746	738 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	SHH	Q15465	462 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	GJC2	Q5T442	439 aa	Predicted RBP	13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	ZNF697	Q5TEC3	545 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	SLC39A5	Q6ZMH5	540 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	DPP9	Q86TI2	863 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	FAM161B	Q96MY7	647 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	ANTXR1	Q9H6X2	564 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	HOXC10	Q9NYD6	342 aa		13.86	□□□□□ -0.19
TCF4-238	ENST00000568169	ADORA2A	P29274	412 aa		13.85	□□□□□ -0.19
TCF4-238	ENST00000568169	SEPT2	Q15019	361 aa		13.85	□□□□□ -0.19
TCF4-238	ENST00000568169	SNX17	Q15036	470 aa		13.85	□□□□□ -0.19
TCF4-238	ENST00000568169	ZKSCAN2	Q63HK3	967 aa		13.85	□□□□□ -0.19
TCF4-238	ENST00000568169	SHCBP1	Q8NEM2	672 aa		13.85	□□□□□ -0.19
TCF4-238	ENST00000568169	RIOK1	Q9BRS2	568 aa	Known RBP	13.85	□□□□□ -0.19
TCF4-238	ENST00000568169	ATP11B	Q9Y2G3	1177 aa		13.85	□□□□□ -0.19
TCF4-238	ENST00000568169		A0A1W2PRG0	241 aa		13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	SEPT4	O43236	478 aa		13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	COBL	O75128	1261 aa		13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	C9orf50	Q5SZB4	431 aa		13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	CDX2	Q99626	313 aa	Predicted RBP	13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	SPATC1L	Q9H0A9	340 aa		13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	C1orf115	Q9H7X2	142 aa		13.84	□□□□□ -0.19
TCF4-238	ENST00000568169	KBTBD13	C9JR72	458 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	POLR3D	P05423	398 aa	Predicted RBP	13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	ERCC3	P19447	782 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	ANO1	Q5XXA6	986 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	MB21D1	Q8N884	522 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	SEMA6B	Q9H3T3	888 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	MYH7	P12883	1935 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	TTC28	Q96AY4	2481 aa		13.83	□□□□□ -0.2
TCF4-238	ENST00000568169	MAGEB6P1	A0A0J9YX57	407 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	EVX2	Q03828	476 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	TRIM60	Q495X7	471 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	KIAA1755	Q5JYT7	1200 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	PRAMEF19	Q5SWL8	479 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	C1orf53	Q5VUE5	145 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	ABRA	Q8N0Z2	381 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	BAD	Q92934	168 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	TANGO6	Q9C0B7	1094 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	MROH8	Q9H579	483 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	PDLIM7	Q9NR12	457 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	SLC5A4	Q9NY91	659 aa		13.82	□□□□□ -0.2
TCF4-238	ENST00000568169	DNAH12	Q6ZR08	3092 aa		13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	MPHOSPH10	O00566	681 aa	Known RBP	13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	ADCYAP1R1	P41586	468 aa		13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	SMAD3	P84022	425 aa	Known RBP	13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	LRRC41	Q15345	812 aa		13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	SH3RF1	Q7Z6J0	888 aa		13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	MAFA	Q8NHW3	353 aa	Predicted RBP	13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	MCM9	Q9NXL9	1143 aa		13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	MCM3AP	O60318	1980 aa		13.81	□□□□□ -0.2
TCF4-238	ENST00000568169	TRIM43B	A6NCK2	446 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	CCER2	I3L3R5	266 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	PDE6A	P16499	860 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	FAM47A	Q5JRC9	791 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	TMEM179	Q6ZVK1	233 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	AACS	Q86V21	672 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	SIAH1	Q8IUQ4	282 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	FERMT2	Q96AC1	680 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	ATG4C	Q96DT6	458 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	MAML3	Q96JK9	1138 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	TTYH1	Q9H313	450 aa	Predicted RBP	13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	PHF24	Q9UPV7	400 aa		13.8	□□□□□ -0.2
TCF4-238	ENST00000568169	FLOT1	O75955	427 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	TLE2	Q04725	743 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	PLS1	Q14651	629 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	TTF1	Q15361	905 aa	Predicted RBP	13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	SLC9C2	Q5TAH2	1124 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	NCAPG2	Q86XI2	1143 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	ERC1	Q8IUD2	1116 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	SLC44A5	Q8NCS7	719 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	MYLIP	Q8WY64	445 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	SWAP70	Q9UH65	585 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	NRBP1	Q9UHY1	535 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	TMX2	Q9Y320	296 aa		13.79	□□□□□ -0.2
TCF4-238	ENST00000568169	UNC80	Q8N2C7	3258 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	NCOR1	O75376	2440 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	TCRBV5S4A2T	A0A5A2	114 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	CYP2D6	P10635	497 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	RLBP1	P12271	317 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	FCER1A	P12319	257 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	ITGB8	P26012	769 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	CEP85	Q6P2H3	762 aa		13.78	□□□□□ -0.2
TCF4-238	ENST00000568169	CLEC10A	Q8IUN9	316 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms