RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 KRT23Q9C075 422 aa30.64■■■□□ 2.5
NME3-208ENST00000565379 NBPF3Q9H094 633 aa30.64■■■□□ 2.5
NME3-208ENST00000565379 SLC27A2O14975 620 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 HSPA4P34932 840 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 TRDNQ13061 729 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 TMEM179Q6ZVK1 233 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 TBC1D10CQ8IV04 446 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 STK11IPQ8N1F8 1099 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 SMCR8Q8TEV9 937 aaPredicted RBP30.63■■■□□ 2.49
NME3-208ENST00000565379 WDR18Q9BV38 432 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 GABRQQ9UN88 632 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 MGAMO43451 1857 aa30.63■■■□□ 2.49
NME3-208ENST00000565379 GH2P01242 217 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 PRMT2P55345 433 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 PRKCZQ05513 592 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 TSGA10IPQ3SY00 556 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 SH3D19Q5HYK7 790 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 ANKRD13CQ8N6S4 541 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 ESR2Q92731 530 aa30.62■■■□□ 2.49
NME3-208ENST00000565379 PEX10O60683 326 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 KRT32Q14532 448 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 PPP4R3BQ5MIZ7 849 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 KCNB2Q92953 911 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 AS3MTQ9HBK9 375 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 TOMM22Q9NS69 142 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 MYPNQ86TC9 1320 aa30.61■■■□□ 2.49
NME3-208ENST00000565379 MPHOSPH10O00566 681 aaKnown RBP30.6■■■□□ 2.49
NME3-208ENST00000565379 PRDM1O75626 825 aa30.6■■■□□ 2.49
NME3-208ENST00000565379 BACE1P56817 501 aa30.6■■■□□ 2.49
NME3-208ENST00000565379 ASCC2Q9H1I8 757 aaPredicted RBP30.6■■■□□ 2.49
NME3-208ENST00000565379 TSPY3P0CV98 308 aa30.59■■■□□ 2.49
NME3-208ENST00000565379 TSPY8P0CW00 308 aa30.59■■■□□ 2.49
NME3-208ENST00000565379 AKR1B1P15121 316 aa30.59■■■□□ 2.49
NME3-208ENST00000565379 FCGRTP55899 365 aa30.59■■■□□ 2.49
NME3-208ENST00000565379 NEDD1Q8NHV4 660 aa30.59■■■□□ 2.49
NME3-208ENST00000565379 PLIN4Q96Q06 1357 aa30.58■■■□□ 2.49
NME3-208ENST00000565379 DOCK3Q8IZD9 2030 aa30.58■■■□□ 2.49
NME3-208ENST00000565379 TSPY2A6NKD2 308 aa30.58■■■□□ 2.49
NME3-208ENST00000565379 E7EWF7 191 aa30.58■■■□□ 2.49
NME3-208ENST00000565379 RANBP6O60518 1105 aaKnown RBP30.58■■■□□ 2.49
NME3-208ENST00000565379 MTFR1Q15390 333 aa30.58■■■□□ 2.49
NME3-208ENST00000565379 NCOA7Q8NI08 942 aa30.58■■■□□ 2.49
NME3-208ENST00000565379 TFAP4Q01664 338 aa30.57■■■□□ 2.48
NME3-208ENST00000565379 RRP12Q5JTH9 1297 aaKnown RBP30.57■■■□□ 2.48
NME3-208ENST00000565379 RALYLQ86SE5 291 aaKnown RBP30.57■■■□□ 2.48
NME3-208ENST00000565379 RAET1EQ8TD07 263 aa30.57■■■□□ 2.48
NME3-208ENST00000565379 KANSL2Q9H9L4 492 aa30.57■■■□□ 2.48
NME3-208ENST00000565379 TACC3Q9Y6A5 838 aa30.57■■■□□ 2.48
NME3-208ENST00000565379 MYH8P13535 1937 aa30.56■■■□□ 2.48
NME3-208ENST00000565379 CCDC178Q5BJE1 867 aa30.56■■■□□ 2.48
NME3-208ENST00000565379 UPF2Q9HAU5 1272 aaKnown RBP30.56■■■□□ 2.48
NME3-208ENST00000565379 INCENPQ9NQS7 918 aa30.56■■■□□ 2.48
NME3-208ENST00000565379 PNMA3Q9UL41 463 aa30.56■■■□□ 2.48
NME3-208ENST00000565379 NEDD4P46934 1319 aa30.55■■■□□ 2.48
NME3-208ENST00000565379 HOXD10P28358 340 aa30.55■■■□□ 2.48
NME3-208ENST00000565379 RAB3GAP1Q15042 981 aa30.55■■■□□ 2.48
NME3-208ENST00000565379 ZYXQ15942 572 aaKnown RBP30.55■■■□□ 2.48
NME3-208ENST00000565379 EMILIN3Q9NT22 766 aa30.55■■■□□ 2.48
NME3-208ENST00000565379 TCP11L1Q9NUJ3 509 aa30.55■■■□□ 2.48
NME3-208ENST00000565379 USP17L10C9JJH3 530 aa30.54■■■□□ 2.48
NME3-208ENST00000565379 SEC24BO95487 1268 aa30.54■■■□□ 2.48
NME3-208ENST00000565379 GUCY1A2P33402 732 aa30.54■■■□□ 2.48
NME3-208ENST00000565379 ACER1Q8TDN7 264 aa30.54■■■□□ 2.48
NME3-208ENST00000565379 TMOD4Q9NZQ9 345 aa30.54■■■□□ 2.48
NME3-208ENST00000565379 HMGB1P09429 215 aaKnown RBP30.53■■■□□ 2.48
NME3-208ENST00000565379 GRK4P32298 578 aa30.53■■■□□ 2.48
NME3-208ENST00000565379 SEPT2Q15019 361 aa30.53■■■□□ 2.48
NME3-208ENST00000565379 FAM110CQ1W6H9 321 aa30.53■■■□□ 2.48
NME3-208ENST00000565379 FAM47AQ5JRC9 791 aa30.53■■■□□ 2.48
NME3-208ENST00000565379 IQCA1Q86XH1 822 aa30.53■■■□□ 2.48
NME3-208ENST00000565379 P2RX7Q99572 595 aaKnown RBP30.53■■■□□ 2.48
NME3-208ENST00000565379 BACH2Q9BYV9 841 aa30.53■■■□□ 2.48
NME3-208ENST00000565379 IGKV6D-41A0A0C4DH26 115 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 B4E1Z4 1266 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 TNPO2O14787 897 aaKnown RBP30.52■■■□□ 2.48
NME3-208ENST00000565379 KDM4AO75164 1064 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 FLT3LGP49771 235 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 ANAPC15P60006 121 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 POTEEQ6S8J3 1075 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 STOX1Q6ZVD7 989 aa30.52■■■□□ 2.48
NME3-208ENST00000565379 ELNP15502 786 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 PSMA5P28066 241 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 ICA1Q05084 483 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 PABPC4Q13310 644 aaKnown RBP eCLIP30.51■■■□□ 2.472e-8■■■■■ 36.1
NME3-208ENST00000565379 RASEFQ8IZ41 740 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 MTA3Q9BTC8 594 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.51■■■□□ 2.47
NME3-208ENST00000565379 SH2D4AQ9H788 454 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 ARHGEF10LQ9HCE6 1279 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 TXNRD2Q9NNW7 524 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 NYAP2Q9P242 653 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 SYNPO2Q9UMS6 1093 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 SNX14Q9Y5W7 946 aa30.51■■■□□ 2.47
NME3-208ENST00000565379 IRX3P78415 501 aaPredicted RBP30.5■■■□□ 2.47
NME3-208ENST00000565379 HABP4Q5JVS0 413 aaKnown RBP30.5■■■□□ 2.47
NME3-208ENST00000565379 NEK1Q96PY6 1258 aa30.5■■■□□ 2.47
NME3-208ENST00000565379 MTMR4Q9NYA4 1195 aa30.5■■■□□ 2.47
NME3-208ENST00000565379 ZSWIM5Q9P217 1185 aa30.5■■■□□ 2.47
NME3-208ENST00000565379 TAF6LQ9Y6J9 622 aa30.5■■■□□ 2.47
NME3-208ENST00000565379 C19orf81C9J6K1 198 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms