RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CCDC129Q6ZRS4 1044 aa30.24■■■□□ 2.43
AC009041.3-201ENST00000564390 TMX2Q9Y320 296 aa30.24■■■□□ 2.43
AC009041.3-201ENST00000564390 RABGAP1Q9Y3P9 1069 aa30.24■■■□□ 2.43
AC009041.3-201ENST00000564390 PDE4DIPQ5VU43 2346 aa30.24■■■□□ 2.43
AC009041.3-201ENST00000564390 A0A0G2JMZ2 1700 aa30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 EEF2P13639 858 aaKnown RBP30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 RASA1P20936 1047 aa30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 MAPK4P31152 587 aa30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 CCAR1Q8IX12 1150 aaKnown RBP30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 IFNL3Q8IZI9 196 aa30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 SH2D4AQ9H788 454 aa30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 BTBD7Q9P203 1132 aa30.23■■■□□ 2.43
AC009041.3-201ENST00000564390 PATL2C9JE40 543 aaKnown RBP30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 GPR142Q7Z601 462 aa30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 EVI5LQ96CN4 794 aa30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 VCPKMTQ9H867 229 aa30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 MKNK2Q9HBH9 465 aa30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 RLFQ13129 1914 aa30.22■■■□□ 2.43
AC009041.3-201ENST00000564390 GJB1P08034 283 aa30.21■■■□□ 2.43
AC009041.3-201ENST00000564390 CYP2B6P20813 491 aa30.21■■■□□ 2.43
AC009041.3-201ENST00000564390 CWC22Q9HCG8 908 aaKnown RBP30.21■■■□□ 2.43
AC009041.3-201ENST00000564390 PRDM1O75626 825 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 TRIM32Q13049 653 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 WDR78Q5VTH9 848 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 SAMD1Q6SPF0 538 aaPredicted RBP30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 LBX2Q6XYB7 198 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 SOCS4Q8WXH5 440 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 LPAR1Q92633 364 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 NUDT12Q9BQG2 462 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 NACAP1Q9BZK3 213 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 KANSL2Q9H9L4 492 aa30.2■■■□□ 2.43
AC009041.3-201ENST00000564390 HMGCRP04035 888 aa30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 GJA8P48165 433 aa30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 IRX6P78412 446 aaPredicted RBP30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 PRPF38BQ5VTL8 546 aaKnown RBP30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 PLEKHH3Q7Z736 793 aa30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 TRIB2Q92519 343 aa30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 NAPBQ9H115 298 aa30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 PARP14Q460N5 1801 aa30.19■■■□□ 2.42
AC009041.3-201ENST00000564390 FOXP2O15409 715 aa30.18■■■□□ 2.42
AC009041.3-201ENST00000564390 RAD21O60216 631 aa30.18■■■□□ 2.42
AC009041.3-201ENST00000564390 CCNA1P78396 465 aa30.18■■■□□ 2.42
AC009041.3-201ENST00000564390 COG2Q14746 738 aa30.18■■■□□ 2.42
AC009041.3-201ENST00000564390 CHD1LQ86WJ1 897 aa30.18■■■□□ 2.42
AC009041.3-201ENST00000564390 U2AF1L4Q8WU68 220 aaKnown RBP30.18■■■□□ 2.42
AC009041.3-201ENST00000564390 FLOT1O75955 427 aa30.17■■■□□ 2.42
AC009041.3-201ENST00000564390 NKX2-3Q8TAU0 364 aa30.17■■■□□ 2.42
AC009041.3-201ENST00000564390 WDR46O15213 610 aaKnown RBP30.16■■■□□ 2.42
AC009041.3-201ENST00000564390 NUCB1Q02818 461 aa30.16■■■□□ 2.42
AC009041.3-201ENST00000564390 MORN1Q5T089 497 aa30.16■■■□□ 2.42
AC009041.3-201ENST00000564390 FAM227BQ96M60 508 aa30.16■■■□□ 2.42
AC009041.3-201ENST00000564390 TRIM6-TRIM34B2RNG4 842 aa30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 VPS53Q5VIR6 699 aa30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 USP6NLQ92738 828 aa30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 ATG4CQ96DT6 458 aa30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 DEFB118Q96PH6 123 aa30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 HOXC10Q9NYD6 342 aa30.15■■■□□ 2.42
AC009041.3-201ENST00000564390 A0A0D9SFI3 127 aa30.14■■■□□ 2.42
AC009041.3-201ENST00000564390 PPARAQ07869 468 aa30.14■■■□□ 2.42
AC009041.3-201ENST00000564390 CCL14Q16627 93 aa30.14■■■□□ 2.42
AC009041.3-201ENST00000564390 GOPCQ9HD26 462 aa30.14■■■□□ 2.42
AC009041.3-201ENST00000564390 PAK6Q9NQU5 681 aaPredicted RBP30.14■■■□□ 2.42
AC009041.3-201ENST00000564390 DSG3P32926 999 aa30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 RGS2P41220 211 aa30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 PLEKHM2Q8IWE5 1019 aa30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 ZNF444Q8N0Y2 327 aaPredicted RBP30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 RILPL2Q969X0 211 aa30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 APBA2Q99767 749 aa30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 FBXO28Q9NVF7 368 aa30.13■■■□□ 2.41
AC009041.3-201ENST00000564390 SGPL1O95470 568 aa30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 XRCC5P13010 732 aaKnown RBP30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 ZKSCAN1P17029 563 aaPredicted RBP30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 FAM83BQ5T0W9 1011 aa30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 NUP88Q99567 741 aaPredicted RBP30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 MOV10L1Q9BXT6 1211 aaKnown RBP30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 ZNF287Q9HBT7 754 aa30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 MYH4Q9Y623 1939 aa30.12■■■□□ 2.41
AC009041.3-201ENST00000564390 COL11A1P12107 1806 aaPredicted RBP30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 IGKV6D-41A0A0C4DH26 115 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 MAP2K5Q13163 448 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 NMIQ13287 307 aaPredicted RBP30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 PLS1Q14651 629 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 SPATC1LQ9H0A9 340 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 HELLSQ9NRZ9 838 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 NYAP2Q9P242 653 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 IVNS1ABPQ9Y6Y0 642 aa30.11■■■□□ 2.41
AC009041.3-201ENST00000564390 PRKAR2AP13861 404 aaKnown RBP30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 PTPREP23469 700 aa30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 CTDSPL2Q05D32 466 aa30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 PDE4BQ07343 736 aa30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 FAM47AQ5JRC9 791 aa30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 CEP95Q96GE4 821 aa30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 CLIP2Q9UDT6 1046 aa30.1■■■□□ 2.41
AC009041.3-201ENST00000564390 SLC15A5A6NIM6 579 aa30.09■■■□□ 2.41
AC009041.3-201ENST00000564390 FARP2O94887 1054 aaPredicted RBP30.09■■■□□ 2.41
AC009041.3-201ENST00000564390 TFRCP02786 760 aaKnown RBP30.09■■■□□ 2.41
AC009041.3-201ENST00000564390 SLC3A2P08195 630 aaKnown RBP30.09■■■□□ 2.41
AC009041.3-201ENST00000564390 MB21D1Q8N884 522 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms