RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SIPA1L1O43166 1804 aa19.55■□□□□ 0.72
RNF40-205ENST00000563909 A0A1W2PQ45 241 aaPredicted RBP19.54■□□□□ 0.72
RNF40-205ENST00000563909 A0A1W2PQY0 241 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 COBLO75128 1261 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 GH2P01242 217 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 TMEM31Q5JXX7 168 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 PI16Q6UXB8 463 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 C16orf59Q7L2K0 433 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 TGFBRAP1Q8WUH2 860 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 MYO9BQ13459 2157 aa19.54■□□□□ 0.72
RNF40-205ENST00000563909 DCDC2CA8MYV0 355 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 PGK1P00558 417 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 TIMP1P01033 207 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 RARBP10826 455 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 VCAM1P19320 739 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
RNF40-205ENST00000563909 RNF180Q86T96 592 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 ALYREFQ86V81 257 aaKnown RBP19.53■□□□□ 0.72
RNF40-205ENST00000563909 SPATA5Q8NB90 893 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 TOX2Q96NM4 488 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 MOV10L1Q9BXT6 1211 aaKnown RBP19.53■□□□□ 0.72
RNF40-205ENST00000563909 AATFQ9NY61 560 aaKnown RBP eCLIP19.53■□□□□ 0.72
RNF40-205ENST00000563909 SLC5A4Q9NY91 659 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 MSRAQ9UJ68 235 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 PLXNA1Q9UIW2 1896 aa19.53■□□□□ 0.72
RNF40-205ENST00000563909 A0A1B0GUL7 405 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 SPDYE16A6NNV3 312 aaPredicted RBP19.52■□□□□ 0.72
RNF40-205ENST00000563909 KCNQ1P51787 676 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 USP14P54578 494 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 AAK1Q2M2I8 961 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 TMEM240Q5SV17 173 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 MFSD5Q6N075 450 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 CCDC174Q6PII3 467 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 ANKRD33Q7Z3H0 272 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 MICALL1Q8N3F8 863 aa19.52■□□□□ 0.72
RNF40-205ENST00000563909 SAP30BPQ9UHR5 308 aaKnown RBP19.52■□□□□ 0.72
RNF40-205ENST00000563909 BAG3O95817 575 aa19.51■□□□□ 0.71
RNF40-205ENST00000563909 RASIP1Q5U651 963 aa19.51■□□□□ 0.71
RNF40-205ENST00000563909 KIAA1683Q9H0B3 1180 aa19.51■□□□□ 0.71
RNF40-205ENST00000563909 RPAP3Q9H6T3 665 aaPredicted RBP19.51■□□□□ 0.71
RNF40-205ENST00000563909 LRP2BPQ9P2M1 347 aa19.51■□□□□ 0.71
RNF40-205ENST00000563909 TRANK1O15050 2925 aa19.51■□□□□ 0.71
RNF40-205ENST00000563909 FLT1P17948 1338 aa19.51■□□□□ 0.71
RNF40-205ENST00000563909 PLCG2P16885 1265 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 ERCC3P19447 782 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 PPIGQ13427 754 aaKnown RBP eCLIP19.5■□□□□ 0.712e-9■■□□□ 12.7
RNF40-205ENST00000563909 RAB3GAP1Q15042 981 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 RAB30Q15771 203 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 ALDH1L2Q3SY69 923 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 ACER1Q8TDN7 264 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 NEUROD6Q96NK8 337 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 SLC28A3Q9HAS3 691 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 MUC6Q6W4X9 2439 aa19.5■□□□□ 0.71
RNF40-205ENST00000563909 HLA-DOAP06340 250 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 ZNF365Q70YC5 407 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 SSH1Q8WYL5 1049 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 MAML3Q96JK9 1138 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 SPATC1LQ9H0A9 340 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 NKX2-4Q9H2Z4 354 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 COPRSQ9NQ92 184 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 TBX21Q9UL17 535 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 AKAP2Q9Y2D5 859 aa19.49■□□□□ 0.71
RNF40-205ENST00000563909 ZNF236Q9UL36 1845 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 UBTFL1P0CB47 393 aaPredicted RBP19.48■□□□□ 0.71
RNF40-205ENST00000563909 ACRP10323 421 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 CSF2RAP15509 400 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 TFCP2Q12800 502 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 SKIV2LQ15477 1246 aaKnown RBP19.48■□□□□ 0.71
RNF40-205ENST00000563909 GORABQ5T7V8 394 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 NAA16Q6N069 864 aaPredicted RBP19.48■□□□□ 0.71
RNF40-205ENST00000563909 SHCBP1Q8NEM2 672 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 STARD7Q9NQZ5 370 aa19.48■□□□□ 0.71
RNF40-205ENST00000563909 ACLYP53396 1101 aa19.47■□□□□ 0.71
RNF40-205ENST00000563909 PPP4CP60510 307 aa19.47■□□□□ 0.71
RNF40-205ENST00000563909 COG2Q14746 738 aa19.47■□□□□ 0.71
RNF40-205ENST00000563909 HOXC10Q9NYD6 342 aa19.47■□□□□ 0.71
RNF40-205ENST00000563909 PLS1Q14651 629 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 TATDN1Q6P1N9 297 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 PSRC1Q6PGN9 363 aaPredicted RBP19.46■□□□□ 0.71
RNF40-205ENST00000563909 NCAPG2Q86XI2 1143 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 ABRAQ8N0Z2 381 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 TMEM199Q8N511 208 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 NUP133Q8WUM0 1156 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 MROH8Q9H579 483 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
RNF40-205ENST00000563909 YBX2Q9Y2T7 364 aaKnown RBP19.46■□□□□ 0.71
RNF40-205ENST00000563909 FAM86C2PA6NEL3 165 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 ERC2O15083 957 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 GPR37L1O60883 481 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 TAL1P17542 331 aaPredicted RBP19.45■□□□□ 0.7
RNF40-205ENST00000563909 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
RNF40-205ENST00000563909 ADGRA1Q86SQ6 560 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 HERVK_113Q902F9 699 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
RNF40-205ENST00000563909 TSEN34Q9BSV6 310 aaKnown RBP19.45■□□□□ 0.7
RNF40-205ENST00000563909 C11orf16Q9NQ32 467 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 SMCHD1A6NHR9 2005 aa19.45■□□□□ 0.7
RNF40-205ENST00000563909 APBB1O00213 710 aa19.44■□□□□ 0.7
RNF40-205ENST00000563909 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms