RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PTPREP23469 700 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CDK8P49336 464 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 ALX1Q15699 326 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CCL15Q16663 113 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CERKLQ49MI3 558 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 PRRT2Q7Z6L0 340 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 SLC44A5Q8NCS7 719 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 WDR18Q9BV38 432 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 TRIM34Q9BYJ4 488 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 NACAP1Q9BZK3 213 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 IL25Q9H293 177 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 ZMYM6O95789 1325 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 TRPA1O75762 1119 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 GH2P01242 217 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 APPP05067 770 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 HSPA8P11142 646 aaKnown RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 OSBPP22059 807 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CHMLP26374 656 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 GUCY1A2P33402 732 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 TDO2P48775 406 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CTCFP49711 727 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 BMP2KLQ5H9B9 411 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 CWC27Q6UX04 472 aaKnown RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 AMOTL1Q8IY63 956 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 FAM43AQ8N2R8 423 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 ZNF280CQ8ND82 737 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 ZCCHC17Q9NP64 241 aaKnown RBP7.39□□□□□ -1.23
CNOT1-204ENST00000563130 DIAPH3Q9NSV4 1193 aa7.39□□□□□ -1.23
CNOT1-204ENST00000563130 ATAD5Q96QE3 1844 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 BTBD19C9JJ37 291 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 FGAP02671 866 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 SPP2Q13103 211 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 ABCB5Q2M3G0 1257 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 NOM1Q5C9Z4 860 aaKnown RBP7.38□□□□□ -1.23
CNOT1-204ENST00000563130 SH3D19Q5HYK7 790 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 CCDC17Q96LX7 622 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 KCNK17Q96T54 332 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 NAPBQ9H115 298 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 ANAPC4Q9UJX5 808 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 RAD50Q92878 1312 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 PTPRFP10586 1907 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 TRIM75PA6NK02 468 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 MINDY4BA8MYZ0 360 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 MAP3K7O43318 606 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 FGRP09769 529 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 AKR1B1P15121 316 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 MFAP1P55081 439 aaKnown RBP7.38□□□□□ -1.23
CNOT1-204ENST00000563130 BACE1P56817 501 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 PPARAQ07869 468 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 OTUD7BQ6GQQ9 843 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 GPAT2Q6NUI2 795 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 ANKRD23Q86SG2 305 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 R3HDMLQ9H3Y0 253 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 AS3MTQ9HBK9 375 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 PRDM10Q9NQV6 1147 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 TSKSQ9UJT2 592 aa7.38□□□□□ -1.23
CNOT1-204ENST00000563130 RASA1P20936 1047 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 LBX1P52954 281 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 SEPT2Q15019 361 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 TMEM179Q6ZVK1 233 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 FASTKD5Q7L8L6 764 aaKnown RBP7.37□□□□□ -1.23
CNOT1-204ENST00000563130 SIAH1Q8IUQ4 282 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 PROCA1Q8NCQ7 364 aaPredicted RBP7.37□□□□□ -1.23
CNOT1-204ENST00000563130 DSCC1Q9BVC3 393 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.37□□□□□ -1.23
CNOT1-204ENST00000563130 CABP5Q9NP86 173 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 SLC45A1Q9Y2W3 748 aa7.37□□□□□ -1.23
CNOT1-204ENST00000563130 C19orf81C9J6K1 198 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 USP17L10C9JJH3 530 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 SGSM2O43147 1006 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 TBC1D8O95759 1140 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 CRHR2Q13324 411 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 RAB3GAP1Q15042 981 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 C6orf132Q5T0Z8 1188 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 POTEEQ6S8J3 1075 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 C12orf42Q96LP6 360 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNOT1-204ENST00000563130 TACC3Q9Y6A5 838 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 GREB1LQ9C091 1923 aaPredicted RBP7.36□□□□□ -1.23
CNOT1-204ENST00000563130 IGKV6D-41A0A0C4DH26 115 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 A0A1W2PRG0 241 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 PDHXO00330 501 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 HMGCS2P54868 508 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 DGKZQ13574 1117 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 MTMR2Q13614 643 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 ACER1Q8TDN7 264 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 RUFY2Q8WXA3 655 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 NBPF3Q9H094 633 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 KIAA1683Q9H0B3 1180 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 AGTPBP1Q9UPW5 1226 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 ADGRA2Q96PE1 1338 aa7.36□□□□□ -1.23
CNOT1-204ENST00000563130 LOC285556D6RIA3 1793 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 PLIN4Q96Q06 1357 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 GPR25O00155 361 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 TLR2O60603 784 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 PRDM1O75626 825 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms