RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	BOLA1	Q9Y3E2	137 aa		10.24	□□□□□ -0.77
CKLF-208	ENST00000563092	SRGAP3	O43295	1099 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	CT47B1	P0C2W7	299 aa	Predicted RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	UQCRFS1P1	P0C7P4	283 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	VCAM1	P19320	739 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	CYP2C19	P33261	490 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	NAA16	Q6N069	864 aa	Predicted RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	MAPKAPK5	Q8IW41	473 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	CCAR1	Q8IX12	1150 aa	Known RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	ARRDC4	Q8NCT1	418 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	MYLIP	Q8WY64	445 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	SYMPK	Q92797	1274 aa	Known RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	BAD	Q92934	168 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	NEUROD6	Q96NK8	337 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	API5	Q9BZZ5	524 aa	Known RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	EHD4	Q9H223	541 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	PDLIM7	Q9NR12	457 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	SMC4	Q9NTJ3	1288 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	LRP2BP	Q9P2M1	347 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	PRKAG2	Q9UGJ0	569 aa		10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	NOB1	Q9ULX3	412 aa	Known RBP	10.23	□□□□□ -0.77
CKLF-208	ENST00000563092	TRIM43B	A6NCK2	446 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	SEPT4	O43236	478 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	STRN	O43815	780 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	GH2	P01242	217 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	CYP2E1	P05181	493 aa	Predicted RBP	10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	ITGB8	P26012	769 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	USP14	P54578	494 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	ATP2B2	Q01814	1243 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	ARHGAP45	Q92619	1136 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	HS3ST6	Q96QI5	342 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	GPR108	Q9NPR9	543 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092	ATP11B	Q9Y2G3	1177 aa		10.22	□□□□□ -0.77
CKLF-208	ENST00000563092		A0A0G2JMZ2	1700 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	ANP32C	O43423	234 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	GNAI3	P08754	354 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	GUCY1A2	P33402	732 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	TRIM60	Q495X7	471 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	GJC2	Q5T442	439 aa	Predicted RBP	10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	ATF7IP	Q6VMQ6	1270 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	SH3RF1	Q7Z6J0	888 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	FAM9B	Q8IZU0	186 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	SHCBP1	Q8NEM2	672 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	NOL10	Q9BSC4	688 aa	Known RBP	10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	NDUFB9	Q9Y6M9	179 aa		10.21	□□□□□ -0.77
CKLF-208	ENST00000563092	CHD9	Q3L8U1	2897 aa		10.21	□□□□□ -0.78
CKLF-208	ENST00000563092	POTEB3	A0JP26	581 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	KIAA0355	O15063	1070 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	COBL	O75128	1261 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	HLA-DOA	P06340	250 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	FOSL2	P15408	326 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	ADORA2A	P29274	412 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	CNGA1	P29973	690 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	EPHB4	P54760	987 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	LRRC41	Q15345	812 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	TJAP1	Q5JTD0	557 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	GORAB	Q5T7V8	394 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	POTEB	Q6S5H4	581 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	ABRA	Q8N0Z2	381 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	USP38	Q8NB14	1042 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	ACER1	Q8TDN7	264 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	ROBO3	Q96MS0	1386 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	SERPINB13	Q9UIV8	391 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	PHF24	Q9UPV7	400 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	IVNS1ABP	Q9Y6Y0	642 aa		10.2	□□□□□ -0.78
CKLF-208	ENST00000563092	PNMA6E	A0A0J9YXQ4	647 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	FAM205C	A6NFA0	338 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	KBTBD13	C9JR72	458 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	SHMT1	P34896	483 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	ADCYAP1R1	P41586	468 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	DYNLL1	P63167	89 aa	Known RBP	10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	GABPA	Q06546	454 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	GRIN2C	Q14957	1233 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	CERS3	Q8IU89	383 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	CDCA7L	Q96GN5	454 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	TRIM34	Q9BYJ4	488 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	KRTAP3-3	Q9BYR6	98 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	KRTAP3-2	Q9BYR7	98 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	CWC22	Q9HCG8	908 aa	Known RBP	10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	PIH1D3	Q9NQM4	214 aa	Known RBP	10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	SNRK	Q9NRH2	765 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	SAP30BP	Q9UHR5	308 aa	Known RBP	10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	NRBP1	Q9UHY1	535 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	TACC3	Q9Y6A5	838 aa		10.19	□□□□□ -0.78
CKLF-208	ENST00000563092	BDP1	A6H8Y1	2624 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092		A0A1W2PRG0	241 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	TNFRSF10A	O00220	468 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	COL9A1	P20849	921 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	TLE2	Q04725	743 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	COG2	Q14746	738 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	ZYX	Q15942	572 aa	Known RBP	10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	ABCB5	Q2M3G0	1257 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	TNNI3K	Q59H18	835 aa		10.18	□□□□□ -0.78
CKLF-208	ENST00000563092	TMED8	Q6PL24	325 aa	Predicted RBP	10.18	□□□□□ -0.78

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