RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 RABGAP1Q9Y3P9 1069 aa18.47■□□□□ 0.55
CCDC113-203ENST00000561517 A0A0D9SFI3 127 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 PEX10O60683 326 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 EEF2P13639 858 aaKnown RBP18.46■□□□□ 0.55
CCDC113-203ENST00000561517 Q3C1V9 767 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 MCMDC2Q4G0Z9 681 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 GJD2Q9UKL4 321 aa18.46■□□□□ 0.55
CCDC113-203ENST00000561517 SPDYE16A6NNV3 312 aaPredicted RBP18.45■□□□□ 0.54
CCDC113-203ENST00000561517 CNMDO75829 334 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 PPARAQ07869 468 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 NMIQ13287 307 aaPredicted RBP18.45■□□□□ 0.54
CCDC113-203ENST00000561517 ALX1Q15699 326 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 SLAIN1Q8ND83 568 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 PXYLP1Q8TE99 480 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 PAGR1Q9BTK6 254 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 A0A0G2JMZ2 1700 aa18.45■□□□□ 0.54
CCDC113-203ENST00000561517 IGKV6D-41A0A0C4DH26 115 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 ADCY3O60266 1144 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 SDSP20132 328 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 PDE4AP27815 886 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 PDE4BQ07343 736 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 COG2Q14746 738 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
CCDC113-203ENST00000561517 TMEM106CQ9BVX2 250 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 NYAP2Q9P242 653 aa18.44■□□□□ 0.54
CCDC113-203ENST00000561517 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
CCDC113-203ENST00000561517 PLIN4Q96Q06 1357 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 WDR46O15213 610 aaKnown RBP18.43■□□□□ 0.54
CCDC113-203ENST00000561517 PRDM1O75626 825 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
CCDC113-203ENST00000561517 MAPK4P31152 587 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 ZNF589Q86UQ0 364 aaPredicted RBP18.43■□□□□ 0.54
CCDC113-203ENST00000561517 TANGO6Q9C0B7 1094 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 PORCNQ9H237 461 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 HOXC10Q9NYD6 342 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 BTBD7Q9P203 1132 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
CCDC113-203ENST00000561517 ATP2B2Q01814 1243 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 MTFR1Q15390 333 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 NEDD1Q8NHV4 660 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 GOPCQ9HD26 462 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC113-203ENST00000561517 ZNFX1Q9P2E3 1918 aaKnown RBP18.42■□□□□ 0.54
CCDC113-203ENST00000561517 ZMYM6O95789 1325 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
CCDC113-203ENST00000561517 TNRC18O15417 2968 aaPredicted RBP18.42■□□□□ 0.54
CCDC113-203ENST00000561517 HSPD1P10809 573 aaKnown RBP18.41■□□□□ 0.54
CCDC113-203ENST00000561517 ELNP15502 786 aa18.41■□□□□ 0.54
CCDC113-203ENST00000561517 DSG3P32926 999 aa18.41■□□□□ 0.54
CCDC113-203ENST00000561517 UBXN2AP68543 259 aa18.41■□□□□ 0.54
CCDC113-203ENST00000561517 CCNA1P78396 465 aa18.41■□□□□ 0.54
CCDC113-203ENST00000561517 GPR142Q7Z601 462 aa18.41■□□□□ 0.54
CCDC113-203ENST00000561517 BIN2Q9UBW5 565 aaPredicted RBP18.41■□□□□ 0.54
CCDC113-203ENST00000561517 MYCP01106 439 aaPredicted RBP18.4■□□□□ 0.54
CCDC113-203ENST00000561517 FGAP02671 866 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 EN2P19622 333 aaPredicted RBP18.4■□□□□ 0.54
CCDC113-203ENST00000561517 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 PLEKHH3Q7Z736 793 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 MB21D1Q8N884 522 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 SOCS4Q8WXH5 440 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 USP6NLQ92738 828 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 CEP95Q96GE4 821 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 NUDT12Q9BQG2 462 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 MTMR4Q9NYA4 1195 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 SYNPO2Q9UMS6 1093 aa18.4■□□□□ 0.54
CCDC113-203ENST00000561517 HIP1O00291 1037 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 FLOT1O75955 427 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 FGRP09769 529 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 TSPY3P0CV98 308 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 TSPY8P0CW00 308 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 CCL5P13501 91 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
CCDC113-203ENST00000561517 MORN1Q5T089 497 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 TTC22Q5TAA0 569 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 CCAR1Q8IX12 1150 aaKnown RBP18.39■□□□□ 0.53
CCDC113-203ENST00000561517 CLIP2Q9UDT6 1046 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
CCDC113-203ENST00000561517 LAMA4Q16363 1823 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 F5H6K3 240 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 ORC4O43929 436 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 TTLL1O95922 423 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 INHAP05111 366 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 XRCC5P13010 732 aaKnown RBP18.38■□□□□ 0.53
CCDC113-203ENST00000561517 TFAP4Q01664 338 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 KLRC3Q07444 240 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 FAM47AQ5JRC9 791 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 ATG4CQ96DT6 458 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
CCDC113-203ENST00000561517 NDUFB10O96000 172 aa18.37■□□□□ 0.53
CCDC113-203ENST00000561517 HMGCRP04035 888 aa18.37■□□□□ 0.53
CCDC113-203ENST00000561517 GJB1P08034 283 aa18.37■□□□□ 0.53
CCDC113-203ENST00000561517 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
CCDC113-203ENST00000561517 FAM83BQ5T0W9 1011 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms