RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MAP3K12Q12852 859 aa22.57■■□□□ 1.2
TPM1-226ENST00000560959 MAGEB6Q8N7X4 407 aa22.57■■□□□ 1.2
TPM1-226ENST00000560959 MROH8Q9H579 483 aa22.57■■□□□ 1.2
TPM1-226ENST00000560959 PRUNE2Q8WUY3 3088 aa22.56■■□□□ 1.2
TPM1-226ENST00000560959 ERCC3P19447 782 aa22.56■■□□□ 1.2
TPM1-226ENST00000560959 PLCD1P51178 756 aa22.56■■□□□ 1.2
TPM1-226ENST00000560959 PRDM5Q9NQX1 630 aaPredicted RBP22.56■■□□□ 1.2
TPM1-226ENST00000560959 PDLIM7Q9NR12 457 aa22.56■■□□□ 1.2
TPM1-226ENST00000560959 NRBP1Q9UHY1 535 aa22.56■■□□□ 1.2
TPM1-226ENST00000560959 COBLO75128 1261 aa22.55■■□□□ 1.2
TPM1-226ENST00000560959 SEPT2Q15019 361 aa22.55■■□□□ 1.2
TPM1-226ENST00000560959 LRRC41Q15345 812 aa22.55■■□□□ 1.2
TPM1-226ENST00000560959 TRIM60Q495X7 471 aa22.55■■□□□ 1.2
TPM1-226ENST00000560959 SYMPKQ92797 1274 aaKnown RBP22.55■■□□□ 1.2
TPM1-226ENST00000560959 TTYH1Q9H313 450 aaPredicted RBP22.55■■□□□ 1.2
TPM1-226ENST00000560959 TACC3Q9Y6A5 838 aa22.55■■□□□ 1.2
TPM1-226ENST00000560959 RLFQ13129 1914 aa22.55■■□□□ 1.2
TPM1-226ENST00000560959 LTBP2Q14767 1821 aa22.54■■□□□ 1.2
TPM1-226ENST00000560959 TRIM43BA6NCK2 446 aa22.54■■□□□ 1.2
TPM1-226ENST00000560959 ADCYAP1R1P41586 468 aa22.54■■□□□ 1.2
TPM1-226ENST00000560959 TRIM43Q96BQ3 446 aaPredicted RBP22.54■■□□□ 1.2
TPM1-226ENST00000560959 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
TPM1-226ENST00000560959 RIOK1Q9BRS2 568 aaKnown RBP22.54■■□□□ 1.2
TPM1-226ENST00000560959 PRDM6Q9NQX0 595 aa22.54■■□□□ 1.2
TPM1-226ENST00000560959 ZNF236Q9UL36 1845 aa22.54■■□□□ 1.2
TPM1-226ENST00000560959 MYH1P12882 1939 aa22.53■■□□□ 1.2
TPM1-226ENST00000560959 A0A1W2PRG0 241 aa22.53■■□□□ 1.2
TPM1-226ENST00000560959 POLR3DP05423 398 aaPredicted RBP22.53■■□□□ 1.2
TPM1-226ENST00000560959 DSG3P32926 999 aa22.53■■□□□ 1.2
TPM1-226ENST00000560959 FRAT1Q92837 279 aaPredicted RBP22.53■■□□□ 1.2
TPM1-226ENST00000560959 CLUAP1Q96AJ1 413 aa22.53■■□□□ 1.2
TPM1-226ENST00000560959 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
TPM1-226ENST00000560959 TNNQ9UQP3 1299 aa22.53■■□□□ 1.2
TPM1-226ENST00000560959 CDH23Q9H251 3354 aa22.53■■□□□ 1.2
TPM1-226ENST00000560959 ANO1Q5XXA6 986 aa22.52■■□□□ 1.2
TPM1-226ENST00000560959 SH3RF1Q7Z6J0 888 aa22.52■■□□□ 1.2
TPM1-226ENST00000560959 MYLIPQ8WY64 445 aa22.52■■□□□ 1.2
TPM1-226ENST00000560959 MAML3Q96JK9 1138 aa22.52■■□□□ 1.2
TPM1-226ENST00000560959 TLR7Q9NYK1 1049 aaKnown RBP22.52■■□□□ 1.2
TPM1-226ENST00000560959 PHF24Q9UPV7 400 aa22.52■■□□□ 1.2
TPM1-226ENST00000560959 BCAR3O75815 825 aa22.51■■□□□ 1.19
TPM1-226ENST00000560959 TMEM57Q8N5G2 664 aa22.51■■□□□ 1.19
TPM1-226ENST00000560959 TANGO6Q9C0B7 1094 aa22.51■■□□□ 1.19
TPM1-226ENST00000560959 ANTXR1Q9H6X2 564 aa22.51■■□□□ 1.19
TPM1-226ENST00000560959 MYO5AQ9Y4I1 1855 aaKnown RBP22.5■■□□□ 1.19
TPM1-226ENST00000560959 MAGEB6P1A0A0J9YX57 407 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 SLC25A27O95847 323 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 FCER1AP12319 257 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 FOSL2P15408 326 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 TLE2Q04725 743 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 PRAMEF19Q5SWL8 479 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 TMEM179Q6ZVK1 233 aa22.5■■□□□ 1.19
TPM1-226ENST00000560959 KIAA0355O15063 1070 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 CLTBP09497 229 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 TTF1Q15361 905 aaPredicted RBP22.49■■□□□ 1.19
TPM1-226ENST00000560959 FAM47AQ5JRC9 791 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 RNF180Q86T96 592 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 NCAPG2Q86XI2 1143 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 FERMT2Q96AC1 680 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 CRNKL1Q9BZJ0 848 aaKnown RBP22.49■■□□□ 1.19
TPM1-226ENST00000560959 SWAP70Q9UH65 585 aa22.49■■□□□ 1.19
TPM1-226ENST00000560959 DIS3Q9Y2L1 958 aaKnown RBP22.49■■□□□ 1.19
TPM1-226ENST00000560959 MPHOSPH10O00566 681 aaKnown RBP22.48■■□□□ 1.19
TPM1-226ENST00000560959 MYCNP04198 464 aaPredicted RBP22.48■■□□□ 1.19
TPM1-226ENST00000560959 RARBP10826 455 aa22.48■■□□□ 1.19
TPM1-226ENST00000560959 SH2D4AQ9H788 454 aa22.48■■□□□ 1.19
TPM1-226ENST00000560959 XPNPEP3Q9NQH7 507 aa22.48■■□□□ 1.19
TPM1-226ENST00000560959 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
TPM1-226ENST00000560959 TMX2Q9Y320 296 aa22.48■■□□□ 1.19
TPM1-226ENST00000560959 FLOT1O75955 427 aa22.47■■□□□ 1.19
TPM1-226ENST00000560959 ITGB8P26012 769 aa22.47■■□□□ 1.19
TPM1-226ENST00000560959 PLS1Q14651 629 aa22.47■■□□□ 1.19
TPM1-226ENST00000560959 RNPC3Q96LT9 517 aaKnown RBP22.47■■□□□ 1.19
TPM1-226ENST00000560959 TOX2Q96NM4 488 aa22.47■■□□□ 1.19
TPM1-226ENST00000560959 ADAMTS5Q9UNA0 930 aa22.47■■□□□ 1.19
TPM1-226ENST00000560959 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.46■■□□□ 1.19
TPM1-226ENST00000560959 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.46■■□□□ 1.19
TPM1-226ENST00000560959 KIAA1755Q5JYT7 1200 aa22.46■■□□□ 1.19
TPM1-226ENST00000560959 ERC1Q8IUD2 1116 aa22.46■■□□□ 1.19
TPM1-226ENST00000560959 SIAH1Q8IUQ4 282 aa22.46■■□□□ 1.19
TPM1-226ENST00000560959 TSEN34Q9BSV6 310 aaKnown RBP22.46■■□□□ 1.19
TPM1-226ENST00000560959 VCPKMTQ9H867 229 aa22.46■■□□□ 1.19
TPM1-226ENST00000560959 ARHGEF10LQ9HCE6 1279 aa22.46■■□□□ 1.19
TPM1-226ENST00000560959 ROBO3Q96MS0 1386 aa22.46■■□□□ 1.19
TPM1-226ENST00000560959 WDR46O15213 610 aaKnown RBP22.45■■□□□ 1.18
TPM1-226ENST00000560959 RAG1P15918 1043 aa22.45■■□□□ 1.18
TPM1-226ENST00000560959 SLC9C2Q5TAH2 1124 aa22.45■■□□□ 1.18
TPM1-226ENST00000560959 ANKRD33Q7Z3H0 272 aa22.45■■□□□ 1.18
TPM1-226ENST00000560959 ATG4CQ96DT6 458 aa22.45■■□□□ 1.18
TPM1-226ENST00000560959 CCDC17Q96LX7 622 aa22.45■■□□□ 1.18
TPM1-226ENST00000560959 TINF2Q9BSI4 451 aa22.45■■□□□ 1.18
TPM1-226ENST00000560959 DCP1AQ9NPI6 582 aaPredicted RBP22.45■■□□□ 1.18
TPM1-226ENST00000560959 A0A0G2JMZ2 1700 aa22.44■■□□□ 1.18
TPM1-226ENST00000560959 EPHB4P54760 987 aa22.44■■□□□ 1.18
TPM1-226ENST00000560959 FPGSQ05932 587 aa22.44■■□□□ 1.18
TPM1-226ENST00000560959 TMEM132BQ14DG7 1078 aa22.44■■□□□ 1.18
TPM1-226ENST00000560959 RIOX2Q8IUF8 465 aa22.44■■□□□ 1.18
TPM1-226ENST00000560959 MUC3AQ02505 3323 aa22.44■■□□□ 1.18
TPM1-226ENST00000560959 A0A1W2PQ45 241 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms