RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 ATL3Q6DD88 541 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 TMTC3Q6ZXV5 915 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 CEP95Q96GE4 821 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.3□□□□□ -0.44
CRTC3-209ENST00000560320 CFAP45Q9UL16 551 aa12.3□□□□□ -0.44
CRTC3-209ENST00000560320 DDX49Q9Y6V7 483 aaKnown RBP12.3□□□□□ -0.44
CRTC3-209ENST00000560320 BAZ2BQ9UIF8 2168 aaKnown RBP12.29□□□□□ -0.44
CRTC3-209ENST00000560320 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
CRTC3-209ENST00000560320 FIBPO43427 364 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 PARP1P09874 1014 aaKnown RBP12.29□□□□□ -0.44
CRTC3-209ENST00000560320 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
CRTC3-209ENST00000560320 BRAPQ7Z569 592 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 MICALL2Q8IY33 904 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 CCDC82Q8N4S0 544 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
CRTC3-209ENST00000560320 BRMS1Q9HCU9 246 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 MTMR4Q9NYA4 1195 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
CRTC3-209ENST00000560320 MTMR7Q9Y216 660 aa12.29□□□□□ -0.44
CRTC3-209ENST00000560320 GOLGA6L4A6NEF3 574 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 WNT10BO00744 389 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 ATP2B2Q01814 1243 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
CRTC3-209ENST00000560320 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 KRT40Q6A162 431 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 TMEM179Q6ZVK1 233 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 SH3BP5LQ7L8J4 393 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
CRTC3-209ENST00000560320 KANSL2Q9H9L4 492 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 LMBRD1Q9NUN5 540 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 CLIP2Q9UDT6 1046 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
CRTC3-209ENST00000560320 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 ASPRV1Q53RT3 343 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 TATDN1Q6P1N9 297 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 NBPF11Q86T75 865 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 USP48Q86UV5 1035 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 METTL16Q86W50 562 aaKnown RBP12.27□□□□□ -0.45
CRTC3-209ENST00000560320 GPC2Q8N158 579 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 CMTR1Q8N1G2 835 aaKnown RBP12.27□□□□□ -0.45
CRTC3-209ENST00000560320 TMEM87AQ8NBN3 555 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.45
CRTC3-209ENST00000560320 HOOK2Q96ED9 719 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 SPATA32Q96LK8 384 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 NYAP2Q9P242 653 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 V9GY48 417 aaPredicted RBP12.27□□□□□ -0.45
CRTC3-209ENST00000560320 CNTNAP5Q8WYK1 1306 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 ZNF541Q9H0D2 1346 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 ATAD5Q96QE3 1844 aa12.27□□□□□ -0.45
CRTC3-209ENST00000560320 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
CRTC3-209ENST00000560320 NOVP48745 357 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 KLHL40Q2TBA0 621 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 OTUD7BQ6GQQ9 843 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
CRTC3-209ENST00000560320 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
CRTC3-209ENST00000560320 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 RNF181Q9P0P0 153 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 ISY1Q9ULR0 285 aaKnown RBP12.26□□□□□ -0.45
CRTC3-209ENST00000560320 CNTNAP1P78357 1384 aa12.26□□□□□ -0.45
CRTC3-209ENST00000560320 PALM3A6NDB9 673 aaPredicted RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 FAM196BA6NMK8 535 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 KLRF2D3W0D1 207 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 TBC1D12O60347 775 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 SCG2P13521 617 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 CALML3P27482 149 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 UBE2HP62256 183 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 KIF23Q02241 960 aaPredicted RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 ICA1Q05084 483 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 CCDC96Q2M329 555 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 FAM177A1Q8N128 213 aaPredicted RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 LRRC47Q8N1G4 583 aaKnown RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 RRP36Q96EU6 259 aaKnown RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 SPZ1Q9BXG8 430 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 DNAJC18Q9H819 358 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 GDPD2Q9HCC8 539 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 WBP1LQ9NX94 342 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
CRTC3-209ENST00000560320 MAD2L2Q9UI95 211 aa12.25□□□□□ -0.45
CRTC3-209ENST00000560320 RAD21O60216 631 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 ELP1O95163 1332 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 GDF11O95390 407 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 MMP1P03956 469 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 POLR2AP24928 1970 aaKnown RBP12.24□□□□□ -0.45
CRTC3-209ENST00000560320 KRT2P35908 639 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 FUT2Q10981 343 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 SEPT2Q15019 361 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms