RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NAPBQ9H115 298 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 PORCNQ9H237 461 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 MKNK2Q9HBH9 465 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 PLXNB2O15031 1838 aa13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
RABGGTA-216ENST00000560243 EN2P19622 333 aaPredicted RBP13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 ERVK-9P63128 1117 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 ERVK-24P63145 666 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 PPARAQ07869 468 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 MTFR1Q15390 333 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 NBPF11Q86T75 865 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 TANGO6Q9C0B7 1094 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 KANSL2Q9H9L4 492 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 HELLSQ9NRZ9 838 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 GJD2Q9UKL4 321 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 TACC3Q9Y6A5 838 aa13.9□□□□□ -0.18
RABGGTA-216ENST00000560243 SPDYE16A6NNV3 312 aaPredicted RBP13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 ADCY3O60266 1144 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 SDSP20132 328 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 MCMDC2Q4G0Z9 681 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 COA7Q96BR5 231 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 VCPKMTQ9H867 229 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 BTBD7Q9P203 1132 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 PARP14Q460N5 1801 aa13.89□□□□□ -0.19
RABGGTA-216ENST00000560243 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 IRF5Q13568 498 aa13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 FAM47AQ5JRC9 791 aa13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 ZNF444Q8N0Y2 327 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 RABGAP1Q9Y3P9 1069 aa13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 MYH4Q9Y623 1939 aa13.88□□□□□ -0.19
RABGGTA-216ENST00000560243 RAD21O60216 631 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 FGAP02671 866 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 COG2Q14746 738 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 ALX1Q15699 326 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 LBX2Q6XYB7 198 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 SLAIN1Q8ND83 568 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 LPAR1Q92633 364 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 CEP95Q96GE4 821 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 NUP88Q99567 741 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 FBXO28Q9NVF7 368 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 A0A0G2JMZ2 1700 aa13.87□□□□□ -0.19
RABGGTA-216ENST00000560243 FLOT1O75955 427 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 INHAP05111 366 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 CCL5P13501 91 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 GSPT1P15170 499 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 TFAP4Q01664 338 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 PDE4BQ07343 736 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 ATG4CQ96DT6 458 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 NYAP2Q9P242 653 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
RABGGTA-216ENST00000560243 COL11A1P12107 1806 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 SLC3A2P08195 630 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 CYP2B6P20813 491 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 MAPK4P31152 587 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 DSG3P32926 999 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 TRIM32Q13049 653 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 TTC22Q5TAA0 569 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 GPR142Q7Z601 462 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 NEDD1Q8NHV4 660 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 PXYLP1Q8TE99 480 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 ZNF287Q9HBT7 754 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 GOPCQ9HD26 462 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 MTMR4Q9NYA4 1195 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 HOXC10Q9NYD6 342 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
RABGGTA-216ENST00000560243 PLIN4Q96Q06 1357 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 F5H6K3 240 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 NMT2O60551 498 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 NDUFB10O96000 172 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 HAND2P61296 217 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 KLRC3Q07444 240 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 MORN1Q5T089 497 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 PLEKHH3Q7Z736 793 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 NKX2-3Q8TAU0 364 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 TRIB2Q92519 343 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 USP6NLQ92738 828 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 SHISA4Q96DD7 197 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 MOV10L1Q9BXT6 1211 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms