RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 SLC4A4Q9Y6R1 1079 aa12.46□□□□□ -0.41
CTDSPL2-205ENST00000558968 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.42
CTDSPL2-205ENST00000558968 PLXNA1Q9UIW2 1896 aa12.46□□□□□ -0.42
CTDSPL2-205ENST00000558968 USP17L12C9JPN9 530 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 USP17L21D6R901 530 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 CAPN2P17655 700 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 CCND3P30281 292 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 CDK8P49336 464 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 CCNA1P78396 465 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 MAP2K5Q13163 448 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 C12orf60Q5U649 245 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 ANKLE1Q8NAG6 615 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 APBA2Q99767 749 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 TANGO6Q9C0B7 1094 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 SMCHD1A6NHR9 2005 aa12.45□□□□□ -0.42
CTDSPL2-205ENST00000558968 ZNF236Q9UL36 1845 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 PTPREP23469 700 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 ICA1Q05084 483 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 ZSCAN25Q6NSZ9 544 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 SIAH1Q8IUQ4 282 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 AMOTL1Q8IY63 956 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 C7orf61Q8IZ16 206 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 SPICE1Q8N0Z3 855 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 DCTPP1Q9H773 170 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 FLRT1Q9NZU1 646 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 OGDHLQ9ULD0 1010 aa12.44□□□□□ -0.42
CTDSPL2-205ENST00000558968 SLC15A5A6NIM6 579 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 GLRX3O76003 335 aaKnown RBP12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 GRB14Q14449 540 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 COG2Q14746 738 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 STK11IPQ8N1F8 1099 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 NPLOC4Q8TAT6 608 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 C11orf49Q9H6J7 331 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 ARHGEF10LQ9HCE6 1279 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 IVNS1ABPQ9Y6Y0 642 aa12.43□□□□□ -0.42
CTDSPL2-205ENST00000558968 PFASO15067 1338 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 FLOT1O75955 427 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 LHX8Q68G74 356 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 ATG4CQ96DT6 458 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 CCDC17Q96LX7 622 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 STRBPQ96SI9 672 aaKnown RBP12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 SPATC1LQ9H0A9 340 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 ZMYND8Q9ULU4 1186 aaPredicted RBP12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
CTDSPL2-205ENST00000558968 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 ERCC3P19447 782 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 DSG3P32926 999 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 PLS1Q14651 629 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 MFSD14CQ5VZR4 134 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 KBTBD3Q8NAB2 608 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 LPAR1Q92633 364 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 OSBP2Q969R2 916 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 GPATCH3Q96I76 525 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 SH2D4AQ9H788 454 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
CTDSPL2-205ENST00000558968 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 M0R2C6 588 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 RAD21O60216 631 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 SYN1P17600 705 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 ADORA2AP29274 412 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 CNGA1P29973 690 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 CYP2C19P33261 490 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 FBXO28Q9NVF7 368 aa12.4□□□□□ -0.42
CTDSPL2-205ENST00000558968 MCM3APO60318 1980 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 WDR46O15213 610 aaKnown RBP12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 RNF113AO15541 343 aaKnown RBP12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 GPAA1O43292 621 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 COBLO75128 1261 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 HOXC6P09630 235 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 MB21D1Q8N884 522 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 SHCBP1Q8NEM2 672 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 TRPV1Q8NER1 839 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 APPBP2Q92624 585 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 KANSL2Q9H9L4 492 aa12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 EPB41L4AQ9HCS5 686 aaPredicted RBP12.39□□□□□ -0.43
CTDSPL2-205ENST00000558968 COL6A1P12109 1028 aa12.38□□□□□ -0.43
CTDSPL2-205ENST00000558968 RASA1P20936 1047 aa12.38□□□□□ -0.43
CTDSPL2-205ENST00000558968 TMEM132BQ14DG7 1078 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms