RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 CDHR2Q9BYE9 1310 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 SYNRGQ9UMZ2 1314 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 N4BP3O15049 544 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 CDKL5O76039 1030 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 ZNF18P17022 549 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 PSEN1P49768 467 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 ZMYM1Q5SVZ6 1142 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 C9orf131Q5VYM1 1079 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 COPS6Q7L5N1 327 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 RASGRP2Q7LDG7 609 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 MSL3Q8N5Y2 521 aaKnown RBP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 COPRSQ9NQ92 184 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 TRIM10Q9UDY6 481 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 SUFUQ9UMX1 484 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 HPS5Q9UPZ3 1129 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 MEGF6O75095 1541 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 A0A1B0GTH6 734 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 ZNF213O14771 459 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 IARSP41252 1262 aaKnown RBP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 FXR1P51114 621 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 PLCD1P51178 756 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 IRAK1P51617 712 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 ITPK1Q13572 414 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 PTPAQ15257 358 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 SAFBQ15424 915 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 DALRD3Q5D0E6 543 aaKnown RBP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 FKBP15Q5T1M5 1219 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 SWT1Q5T5J6 900 aaKnown RBP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 CCDC70Q6NSX1 233 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 SMYD4Q8IYR2 804 aaPredicted RBP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 CCDC82Q8N4S0 544 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 OTUD6BQ8N6M0 293 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 COG1Q8WTW3 980 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 ARHGEF1Q92888 912 aaKnown RBP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 FAM212AQ96EL1 285 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 MYL10Q9BUA6 226 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 VPS16Q9H269 839 aa5.71□□□□□ -1.5
HMG20A-204ENST00000558288 DDX21Q9NR30 783 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMG20A-204ENST00000558288 TNS1Q9HBL0 1735 aaKnown RBP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 A0A087WZG4 1122 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 NDUFAB1O14561 156 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 ZEB2O60315 1214 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 PRPF6O94906 941 aaKnown RBP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 PHKG2P15735 406 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CDC25AP30304 524 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 USP14P54578 494 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 GRIN1Q05586 938 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 AKAP4Q5JQC9 854 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 RNF187Q5TA31 235 aaPredicted RBP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 WDR93Q6P2C0 686 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 TMTC1Q8IUR5 882 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 SELENOOQ9BVL4 669 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 SLC26A6Q9BXS9 759 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 VIPAS39Q9H9C1 493 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 PIM2Q9P1W9 311 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 RFX7Q2KHR2 1363 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CEMIPQ8WUJ3 1361 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 HSPA6P17066 643 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CASP1P29466 404 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 TDO2P48775 406 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 MMP14P50281 582 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 PPFIA1Q13136 1202 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 TSR1Q2NL82 804 aaKnown RBP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 LMBR1LQ6UX01 489 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CYP26C1Q6V0L0 522 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 SND1Q7KZF4 910 aaKnown RBP eCLIP5.7□□□□□ -1.52e-7■□□□□ 9.4
HMG20A-204ENST00000558288 KIAA1328Q86T90 577 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 AMIGO3Q86WK7 504 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 OSBP2Q969R2 916 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CTAGE1Q96RT6 745 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 MMS19Q96T76 1030 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 MAP3K14Q99558 947 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 SGIP1Q9BQI5 828 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 RRAGCQ9HB90 399 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 JADE2Q9NQC1 790 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 SAR1BQ9Y6B6 198 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 PIK3C2AO00443 1686 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 UTYO14607 1347 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 LAMA4Q16363 1823 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CCDC196A0A1B0GTZ2 297 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 MYO1FO00160 1098 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 RNMTO43148 476 aaKnown RBP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 FGAP02671 866 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 GYPCP04921 128 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 KRT9P35527 623 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 MATR3P43243 847 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 AARSP49588 968 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMG20A-204ENST00000558288 MORC3Q14149 939 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CCDC122Q5T0U0 273 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 SPATA1Q5VX52 437 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 ANKRD18AQ8IVF6 992 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 TFR2Q9UP52 801 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 CTNND2Q9UQB3 1225 aa5.7□□□□□ -1.5
HMG20A-204ENST00000558288 RGPD5Q99666 1765 aa5.69□□□□□ -1.5
HMG20A-204ENST00000558288 GOLGA8AA7E2F4 631 aa5.69□□□□□ -1.5
HMG20A-204ENST00000558288 BTBD18B2RXH4 712 aa5.69□□□□□ -1.5
HMG20A-204ENST00000558288 UBE2Q2LH0YL09 131 aa5.69□□□□□ -1.5
HMG20A-204ENST00000558288 ATP1A1P05023 1023 aaKnown RBP5.69□□□□□ -1.5
HMG20A-204ENST00000558288 ATP1A2P50993 1020 aa5.69□□□□□ -1.5
HMG20A-204ENST00000558288 ERVK-24P63145 666 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms