RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CARS2Q9HA77 564 aaKnown RBP6.95□□□□□ -1.3
ATXN3-246ENST00000557030 KLHL3Q9UH77 587 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 PCDHB14Q9Y5E9 798 aa6.95□□□□□ -1.3
ATXN3-246ENST00000557030 WASH4PA8MWX3 477 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 BIN1O00499 593 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 UBOX5O94941 541 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 ZNF76P36508 570 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 KREMEN1Q96MU8 473 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 CNNM2Q9H8M5 875 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 GMIPQ9P107 970 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 ZSWIM5Q9P217 1185 aa6.94□□□□□ -1.3
ATXN3-246ENST00000557030 ERCC6Q03468 1493 aa6.93□□□□□ -1.3
ATXN3-246ENST00000557030 LRRN2O75325 713 aa6.93□□□□□ -1.3
ATXN3-246ENST00000557030 CLCQ05315 142 aa6.93□□□□□ -1.3
ATXN3-246ENST00000557030 ZNF428Q96B54 188 aa6.93□□□□□ -1.3
ATXN3-246ENST00000557030 KIF2CQ99661 725 aa6.93□□□□□ -1.3
ATXN3-246ENST00000557030 ASPNQ9BXN1 380 aa6.93□□□□□ -1.3
ATXN3-246ENST00000557030 BAZ1BQ9UIG0 1483 aaKnown RBP6.92□□□□□ -1.3
ATXN3-246ENST00000557030 NESP48681 1621 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 MEIS3P2A8K0S8 358 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 SEZ6Q53EL9 994 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 TSPYL5Q86VY4 417 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-246ENST00000557030 POU5F2Q8N7G0 328 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 ATG4CQ96DT6 458 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 SOGA1O94964 1423 aa6.92□□□□□ -1.3
ATXN3-246ENST00000557030 GDNFP39905 211 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
ATXN3-246ENST00000557030 APOBRQ0VD83 1088 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 ZNF394Q53GI3 561 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 ARSHQ5FYA8 562 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 OVOS1Q6IE37 1185 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
ATXN3-246ENST00000557030 METTL16Q86W50 562 aaKnown RBP6.91□□□□□ -1.3
ATXN3-246ENST00000557030 KIAA0825Q8IV33 1275 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 FAM168AQ92567 244 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 ALPK1Q96QP1 1244 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 SPON2Q9BUD6 331 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 KIAA1522Q9P206 1035 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-246ENST00000557030 KCNH3Q9ULD8 1083 aa6.91□□□□□ -1.3
ATXN3-246ENST00000557030 SHISA3A0PJX4 238 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-246ENST00000557030 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 TPP2P29144 1249 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-246ENST00000557030 CCNFP41002 786 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 MLECQ14165 292 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 TMEM40Q8WWA1 233 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 NKD1Q969G9 470 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 RNF34Q969K3 372 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 TRIT1Q9H3H1 467 aaKnown RBP6.9□□□□□ -1.3
ATXN3-246ENST00000557030 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
ATXN3-246ENST00000557030 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 PCDHGB7Q9Y5F8 929 aa6.9□□□□□ -1.3
ATXN3-246ENST00000557030 RUSC2Q8N2Y8 1516 aa6.9□□□□□ -1.31
ATXN3-246ENST00000557030 ZNF503-AS2A6NEH8 195 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 RANGAP1P46060 587 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-246ENST00000557030 ZNF165P49910 485 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 RALGPS1Q5JS13 557 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 NBPF12Q5TAG4 269 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-246ENST00000557030 GK5Q6ZS86 529 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 NLRC3Q7RTR2 1065 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATXN3-246ENST00000557030 ANTXR1Q9H6X2 564 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 SP110Q9HB58 689 aa6.89□□□□□ -1.31
ATXN3-246ENST00000557030 NCAPD3P42695 1498 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 WRNQ14191 1432 aaPredicted RBP eCLIP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 DNAJC25-GNG10A0A024R161 153 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 CENPBP07199 599 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 NME1P15531 152 aaKnown RBP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 RAG1P15918 1043 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 POLR2BP30876 1174 aaKnown RBP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 TNNI2P48788 182 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 RBM25P49756 843 aaKnown RBP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-246ENST00000557030 ZNRF3Q9ULT6 936 aa6.88□□□□□ -1.31
ATXN3-246ENST00000557030 SYNJ1O43426 1573 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 EEA1Q15075 1411 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 GBP1P32455 592 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 AFMP43652 599 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 LRRFIP1Q32MZ4 808 aaKnown RBP6.87□□□□□ -1.31
ATXN3-246ENST00000557030 ZSWIM9Q86XI8 627 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 CCDC120Q96HB5 630 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 TMEM59LQ9UK28 342 aa6.87□□□□□ -1.31
ATXN3-246ENST00000557030 HMGXB3Q12766 1538 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 NBPF9Q3BBW0 867 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 INTS3Q68E01 1043 aaKnown RBP6.86□□□□□ -1.31
ATXN3-246ENST00000557030 CREG2Q8IUH2 290 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 TMEM192Q8IY95 271 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
ATXN3-246ENST00000557030 HDAC8Q9BY41 377 aa6.86□□□□□ -1.31
ATXN3-246ENST00000557030 ADAMTS10Q9H324 1103 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms