RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 FRMPD3Q5JV73 1810 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L15C9J2P7 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L13C9JLJ4 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L11C9JVI0 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L18D6R9N7 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L22D6RA61 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L17D6RBQ6 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L19D6RCP7 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L20D6RJB6 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 TFRCP02786 760 aaKnown RBP7.62□□□□□ -1.19
LGMN-213ENST00000556790 APPP05067 770 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 GJB1P08034 283 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 RASA1P20936 1047 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 GJA8P48165 433 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 GCLCP48506 637 aaPredicted RBP7.62□□□□□ -1.19
LGMN-213ENST00000556790 SLC4A3P48751 1232 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 PRMT2P55345 433 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 UBXN2AP68543 259 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 ICA1Q05084 483 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 CTDSPL2Q05D32 466 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 USP17L24Q0WX57 530 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 PLS1Q14651 629 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 FAM47AQ5JRC9 791 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 C16orf86Q6ZW13 317 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 DPF3Q92784 378 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 PAWRQ96IZ0 340 aaKnown RBP7.62□□□□□ -1.19
LGMN-213ENST00000556790 C12orf42Q96LP6 360 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 FSD1Q9BTV5 496 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.62□□□□□ -1.19
LGMN-213ENST00000556790 CHMP4BQ9H444 224 aaKnown RBP7.62□□□□□ -1.19
LGMN-213ENST00000556790 ATP8A2Q9NTI2 1148 aa7.62□□□□□ -1.19
LGMN-213ENST00000556790 COLQQ9Y215 455 aaPredicted RBP7.62□□□□□ -1.19
LGMN-213ENST00000556790 ZNFX1Q9P2E3 1918 aaKnown RBP7.62□□□□□ -1.19
LGMN-213ENST00000556790 RBAK-RBAKDNI3L0D1 243 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 FARP2O94887 1054 aaPredicted RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 SGPL1O95470 568 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 PRKAR2AP13861 404 aaKnown RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 MX1P20591 662 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 CYP2C19P33261 490 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 TDO2P48775 406 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 MNX1P50219 401 aaPredicted RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 SNAP25P60880 206 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 CACNB2Q08289 660 aaPredicted RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 IRF5Q13568 498 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 PRAMEF19Q5SWL8 479 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 MORN1Q5T089 497 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 FAM83BQ5T0W9 1011 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 TMEM179Q6ZVK1 233 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 PLEKHH3Q7Z736 793 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 UBE2Q1Q7Z7E8 422 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 LRRC47Q8N1G4 583 aaKnown RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 TRPV1Q8NER1 839 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 APPBP2Q92624 585 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 USP6NLQ92738 828 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 FAM227BQ96M60 508 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 MOV10L1Q9BXT6 1211 aaKnown RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 CWC22Q9HCG8 908 aaKnown RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 PAK6Q9NQU5 681 aaPredicted RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 MTMR7Q9Y216 660 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 SUPT16HQ9Y5B9 1047 aaKnown RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 DDX49Q9Y6V7 483 aaKnown RBP7.61□□□□□ -1.19
LGMN-213ENST00000556790 TRIOBPQ9H2D6 2365 aa7.61□□□□□ -1.19
LGMN-213ENST00000556790 A0A0D9SFI3 127 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 NMT2O60551 498 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 COBLO75128 1261 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 FLOT1O75955 427 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 HMGCRP04035 888 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 TMEM132BQ14DG7 1078 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 ZMYM1Q5SVZ6 1142 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 ZSCAN25Q6NSZ9 544 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 CHRDL2Q6WN34 429 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 ZNF589Q86UQ0 364 aaPredicted RBP7.6□□□□□ -1.19
LGMN-213ENST00000556790 SKAP1Q86WV1 359 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 CCAR1Q8IX12 1150 aaKnown RBP7.6□□□□□ -1.19
LGMN-213ENST00000556790 IFNL3Q8IZI9 196 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 PXYLP1Q8TE99 480 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 GPATCH3Q96I76 525 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 NUDT12Q9BQG2 462 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 VCPKMTQ9H867 229 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 CLIP2Q9UDT6 1046 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 SWAP70Q9UH65 585 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 TMX2Q9Y320 296 aa7.6□□□□□ -1.19
LGMN-213ENST00000556790 COL6A3P12111 3177 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 EYSQ5T1H1 3165 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 SMCHD1A6NHR9 2005 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 PGK2P07205 417 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 ZKSCAN1P17029 563 aaPredicted RBP7.59□□□□□ -1.19
LGMN-213ENST00000556790 SYN1P17600 705 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 ERCC3P19447 782 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 PTPREP23469 700 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 CNGA1P29973 690 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 DSG3P32926 999 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 USP14P54578 494 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 PDE1AP54750 535 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 MAP2K5Q13163 448 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
LGMN-213ENST00000556790 COG2Q14746 738 aa7.59□□□□□ -1.19
LGMN-213ENST00000556790 HABP4Q5JVS0 413 aaKnown RBP7.59□□□□□ -1.19
LGMN-213ENST00000556790 LBX2Q6XYB7 198 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 743.8 ms